Pairwise Alignments

Query, 484 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  397 bits (1021), Expect = e-115
 Identities = 211/465 (45%), Positives = 304/465 (65%), Gaps = 3/465 (0%)

Query: 8   TLLCLCIAAPCLPAIAQNDPIELPDIGTVAGSTLTIDQELIYGDAYMRMLRNNQPVINDP 67
           ++L L +      + A ND   LPD+GT A +T ++++E+IYGDAYMR++R++ P++NDP
Sbjct: 16  SVLALMLLGGAAKSFANND---LPDLGTAAVNTFSLEKEMIYGDAYMRVIRSSAPMLNDP 72

Query: 68  VLNEYIDNLGHRLVASANDVKTPFTFFMIRDRNINAFAFFGGYVALHSGLFLHAQSESEL 127
           VL++Y+  LG++LVA A  VKTPF FF++++  INAFAFFGG+VA+H+GLFL+A +ESEL
Sbjct: 73  VLSQYLTELGNKLVAHATGVKTPFYFFLLQNDEINAFAFFGGHVAVHTGLFLNADNESEL 132

Query: 128 ASVMAHEIAHVTQRHLARSMEEQARRSPATIAALAGSLLLAIAAPEAGIAAINATMAGSI 187
           ASV+ HEI HVTQRHLARS+E Q +  PAT+A L G++LL IA P+AG+AA+  T A + 
Sbjct: 133 ASVLGHEITHVTQRHLARSLEAQQKTGPATVAGLLGAILLTIAVPQAGMAALATTQAMAT 192

Query: 188 QGQINYTRSNEKEADRFGIATLAKAGFDANAMPQFFTRLADEYRYASKPPPMLLTHPLPE 247
           Q +INYTR +EKEADR G+  L  AGFD NA  +FF +LA  YR+ + PP MLLTHPLPE
Sbjct: 193 QSKINYTRLHEKEADRIGMQILVDAGFDPNASAEFFGKLASRYRFTTTPPQMLLTHPLPE 252

Query: 248 DRITDSRERARQYPPLKLAPHLDYHLARARIIARYAGIDADAALDWFARSEKKIDATLQP 307
            RI+++R+RA+QYP   +  +L++ LA+ARI  R++    DA L  F +   K     + 
Sbjct: 253 SRISEARDRAQQYPHRYVPDNLNFQLAKARIQVRFSSFSDDAVLSMFEKQLNKQTYGFKE 312

Query: 308 SIQYGKALVYLDLKQFDKAEPLLTQLVKEQPDNHFYLDAISDLYIELKQADKAQSLLEKA 367
           +  YGKAL    LK+FD++E ++ +L+K   +N FY+D  +DL  E K   +A  LLE  
Sbjct: 313 AALYGKALALFRLKKFDESEKIVDELLKIDDNNLFYIDTKTDLLNERKDYAQAIKLLEAQ 372

Query: 368 LKQTPNNSVLTINYANVLLKQDKFTDAIRILQRYTHDNPNDINGWQLLSEANSRLGNSAE 427
               P + V+  N AN+ ++  +   AI +L+     +  +   +QLL+ A  +LGN   
Sbjct: 373 RNLKPTSQVINANLANIYIEAGEPAKAIPLLEDMIFLDKQNQLPYQLLNLAYKKLGNPGM 432

Query: 428 DLAARGEIMALQANWNKAIQFYTQASQLVELGSLAQARYDARIDQ 472
           +  +  E+MAL AN+  AI     A +  E   L  AR +ARI Q
Sbjct: 433 EYFSNAELMALGANYKGAIDQLNFAYRASEGNQLQLARIEARIRQ 477