Pairwise Alignments

Query, 484 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 68/235 (28%), Positives = 110/235 (46%), Gaps = 23/235 (9%)

Query: 50  GDAYMRMLRNNQPVINDPVLNEYIDNLGHRLVASANDVKTPFTFFMIRDRNINAFAFFGG 109
           GDA    ++  Q +  +  L +Y++ + +R+ A   D    +   +     +NAFA  GG
Sbjct: 44  GDASFAEMKKQQKISGNKKLTQYVNCVANRVTAVLPDQTQKWDVVLFDSEQVNAFALPGG 103

Query: 110 YVALHSGLFLHAQSESELASVMAHEIAHVTQRHLARSMEEQARRSPATIAALAGSLLLAI 169
           ++ +++GL   A +  +LA+V+ HE+AHV    LA+   EQ  RS  T       + +A 
Sbjct: 104 HIGVYTGLLKVASTPDQLATVLGHEVAHV----LAQHGNEQVSRSQMT----GMGMQIAD 155

Query: 170 AAPEAGIAA-----INATMAGSIQGQI-NYTRSNEKEADRFGIATLAKAGFDANAMPQFF 223
           AA  AG  +     ++A   G+  G I  + R+ E EAD  G+  +A+AGFD       +
Sbjct: 156 AALGAGGVSNRDLYMSALGLGAQVGVILPFGRAQESEADIMGLELMARAGFDPAQSVVLW 215

Query: 224 TRLADEYRYASKPPPMLLTHPLPEDRITDSRERARQYPPLKLAPHLDYHLARARI 278
             ++       K P +L THP   +RI    +   Q  PL       Y  A+A I
Sbjct: 216 QNMSK--AGGGKGPELLSTHPSNNNRIAQLEQLQGQMQPL-------YQSAKANI 261