Pairwise Alignments

Query, 484 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 481 a.a., TPR domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  129 bits (325), Expect = 2e-34
 Identities = 118/453 (26%), Positives = 192/453 (42%), Gaps = 45/453 (9%)

Query: 42  TIDQELIYGDAYMRMLRNNQPVINDPVLNEYIDNLGHRLVASANDVKTPFTFFMIRDRNI 101
           TI  E+  G  +  ++++  P++ DP +  Y+ ++  RL+  A      F   ++   ++
Sbjct: 49  TIKDEVELGRKFDVLIKSRMPLVEDPEVKVYVQDIVARLLEQAPPQPFDFKTNVLLHNSL 108

Query: 102 NAFAFFGGYVALHSGLFLHAQSESELASVMAHEIAHVTQRHLARSMEEQARRSPATIA-A 160
           NAFA  GG++ +H+GL +    E+E+A V+AHE+AH TQRH+A  +E+    S  ++A A
Sbjct: 109 NAFASPGGFIFVHTGLVMQMDHEAEVAGVLAHELAHATQRHIAGRIEKMQTTSILSMAGA 168

Query: 161 LAGSLLLAIAAPEAGIAAINATMAGSI----QGQINYTRSNEKEADRFGIATLAKAGFDA 216
           LAG+ L        G +   A MAGSI       +NY+R +E EAD  G+  L  AGF  
Sbjct: 169 LAGAFL-------GGGSGKGAAMAGSIAAGQSAMLNYSRVDETEADEIGLRYLIAAGFRP 221

Query: 217 NAMPQFFTRL-ADEYRYASKPPPMLLTHPLPEDRITDSRERARQYP-PLKLAPHLDYHLA 274
             M   F ++   ++   +  P  L THP   +RI     R    P  ++  P+ D    
Sbjct: 222 EGMVGAFEKIRKKQWAMGTDIPSYLSTHPAVNERINSLSARIAALPADIRSRPNDDARFL 281

Query: 275 RARIIARYAGIDADAALDWFARSEKKIDATLQPSI-QYGKALVYLDLKQFDKAEPLLTQL 333
           R R I R    D   +   FA      DA     + Q GKA+++    +  +A     + 
Sbjct: 282 RVRTICRARYGDPAVSERLFA------DAPAGDCLAQLGKAILFSRQNRVAEATAAFDKA 335

Query: 334 VKEQPDNHFYLDAISDLYIELKQADKAQSLLEKALKQTPNNSVLTINYANVLLKQDKFTD 393
           ++  P +          +       +A ++L++A    P++ +    YA +L        
Sbjct: 336 LQCSPKDQLIWREAGRFHYTKGDKGRAAAMLQRATLMNPDDYMALFFYARLLA------- 388

Query: 394 AIRILQRYTHDNPNDINGWQLLSEANSRLGNSAEDLAARGEIMALQANWNKAI------Q 447
                     D+      +Q   E   RL   AE     G ++       KA        
Sbjct: 389 ----------DSGQPQKSYQYFDEVLRRLPEDAEVHYYYGRVLGASGQPFKAYLHLAYSS 438

Query: 448 FYTQASQLVELGSLAQARYDARIDQLMVQRERF 480
            Y+      E     QAR  AR  + M + ERF
Sbjct: 439 LYSNDKHKTE-SFEEQARAQARTPEEMAELERF 470