Pairwise Alignments

Query, 354 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., Predicted permease from Pseudomonas stutzeri RCH2

 Score = 85.5 bits (210), Expect = 2e-21
 Identities = 77/345 (22%), Positives = 151/345 (43%), Gaps = 21/345 (6%)

Query: 18  AASLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQLRRLRIPRTLAVIIVITVF 77
           A  +V  L FG+I + F+G +   +++AI+ A L  +     RRL   R LA  + + V 
Sbjct: 13  ALLVVVSLAFGWILLPFYGAVFWAVILAIIFAPLQRY---LHRRLNQRRNLAAFVTLLVC 69

Query: 78  TGLMILAVFGLVPTIWKQVGNLINDVPNMYNGTQKFITSLPERYPELAHLEIVESVIGNA 137
             + +L V      + ++   L   + +       ++  L +  P+   L++     G+ 
Sbjct: 70  LLVAVLPVILTTGMLVQEGATLYKQIESGELDIGSWVARLRDLLPQSVQLQLQRFGFGDL 129

Query: 138 KNKVLGMGESVVKGSLASLVSLATL------GVYLILVPL-----LVFFLLKDKQEMLRM 186
           ++    M E +  G+L     LAT       G +  L+       L+FF ++D +E++  
Sbjct: 130 ES----MRERLASGALEGSQFLATKAFSFGQGTFQFLISFFVMLYLLFFFIRDGRELVAR 185

Query: 187 ASGILPRNRKLANKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYSVLLAVAV 246
               +P +     +++ +  + +   ++G ++  +  G +  I FA+L +  ++L  V +
Sbjct: 186 IRKAIPLSDAQKRRLFNKFTRVVRATVKGNIVVAITQGALGGIIFAVLGISGALLWGVLM 245

Query: 247 GLSVLIPYIGAAAVTVPVAIVALFQWGLTPQFYTLLIAYGI-IQALDGNVLVPVLFSEAV 305
               L+P +GA  +  PVAI  L    +      +L  YGI +  L  N+L P+L  +  
Sbjct: 246 AFLSLLPAVGAGLIWTPVAIYFLMTGAIWQG--VVLTLYGILVIGLVDNILRPILVGKDT 303

Query: 306 NLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSIDE 350
            +    ++I+ L    L+G  G      +A L  + W    S +E
Sbjct: 304 KMPDYVVLISTLGGLALFGLNGFVIGPLVAALFISTWGLFTSPEE 348