Pairwise Alignments

Query, 354 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 358 a.a., Predicted permease from Pseudomonas stutzeri RCH2

 Score =  353 bits (905), Expect = e-102
 Identities = 181/354 (51%), Positives = 243/354 (68%), Gaps = 3/354 (0%)

Query: 1   MFEMVSRWYKRRFSDPHAASLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQLR 60
           M +++  W +R FSD  A  L  +L   F  +   G ++AP+L  +VLA+L++  V  L 
Sbjct: 1   MIKVLRGWMQRYFSDEEAVVLAVLLFLAFAAVLTLGKMLAPVLAGLVLAFLMQGLVGTLE 60

Query: 61  RLRIPRTLAVIIVITVFTGLMILAVFGLVPTIWKQVGNLINDVPNMYNGTQKFITSLPER 120
           RLR+P  +AV +V  +F G+M++    +VP +W+Q+  L N++P M    Q  +  LPER
Sbjct: 61  RLRVPHLVAVWLVFLMFIGVMVVCTLFIVPLLWQQLLTLFNELPRMLVEWQSLLLLLPER 120

Query: 121 YPELAHLEIVESVIGNAKNKVLGMGESVVKGSLASLVSLATLGVYLILVPLLVFFLLKDK 180
           YP+L   E V   I   + ++   G+ V+  SL+SL  L  L +YL+LVP+LVFF LKD+
Sbjct: 121 YPQLVTEEQVLRGIDFMRGEIGRYGQVVLTSSLSSLPLLIGLMIYLVLVPILVFFFLKDR 180

Query: 181 QEMLRMASGILPRNRKLANKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYSV 240
           Q++     G LPR R L  +V +EMN QI+NYIRGKV+EI+IV  VSY  FA L L Y+ 
Sbjct: 181 QQISDWIKGYLPRERGLITQVSQEMNLQIANYIRGKVIEILIVAVVSYAVFAALGLNYAA 240

Query: 241 LLAVAVGLSVLIPYIGAAAVTVPVAIVALFQWGLTPQFYTLLIAYGIIQALDGNVLVPVL 300
           L+A+ VG+SV++PYIGA  VT+P+A++ +FQWGL  QF+ L++AY IIQ LDGNVLVP+L
Sbjct: 241 LMAMLVGISVVVPYIGATVVTIPIALIGIFQWGLGDQFFYLMVAYAIIQTLDGNVLVPLL 300

Query: 301 FSEAVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSIDEEPAS 354
           FSEAVNLHPVAII AVL+FGGLWGFWGVFFAIPLATL KAV  A P    EPA+
Sbjct: 301 FSEAVNLHPVAIICAVLLFGGLWGFWGVFFAIPLATLFKAVLYAWP---REPAA 351