Pairwise Alignments

Query, 354 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 86/311 (27%), Positives = 146/311 (46%), Gaps = 27/311 (8%)

Query: 38  LIAPLLVAIVLAYLLEWPVTQLRRLRIPRTLAVII----VITVFTGLMILAVFGLVPTIW 93
           LI  L+ AIVLA  +   V QL + R+PR L V++    ++ + TG  +L    + P + 
Sbjct: 34  LILILMSAIVLAASIAPIVNQLEQWRLPRWLGVLVAYGGLLAILTGASLL----VGPLVI 89

Query: 94  KQVGNLINDVPNMYNGTQKFITSLPERY--------PELAHLEIVESVIGNAKNKVLGMG 145
            Q+  L+  +PN+    +     + E+         P+L + + V   + N   ++L   
Sbjct: 90  SQIQTLLRQLPNLVERVELLSIDIAEQLDLQDSPLLPQLVNPQEVAGWVINTSQQLLRQS 149

Query: 146 ESVVKGSLASLVSLATLGVYLILVPLLVFFLLKDKQEMLRMASGIL--PRNRKLANKVWE 203
             + +G L    S+       +L  LL  +L+ D + + R    +   P + +LA  +  
Sbjct: 150 YGITRGILGGFFSV-------VLGLLLSSYLVADSKTLGRGFVRLFAAPWDDRLA-ALLG 201

Query: 204 EMNQQISNYIRGKVLEIVIVGTVSYITFAILDLR-YSVLLAVAVGLSVLIPYIGAAAVTV 262
            + Q++  YIRG+VL  +++G    +    L L  Y++ L    G + LIP++G     +
Sbjct: 202 PVGQRMGAYIRGRVLVSLLLGIAIALGLRTLGLGDYAIGLGAIAGFTNLIPFLGPFLGAI 261

Query: 263 PVAIVALFQWGLTPQFYTLLIAYGIIQALDGNVLVPVLFSEAVNLHPVAIIIAVLVFGGL 322
           P   VAL Q      F  +L+ + IIQ L+  VL P+L   AV +HP+  ++AVL    L
Sbjct: 262 PALFVALAQGDSAWLFLWVLLLFVIIQNLESYVLDPLLVGAAVGIHPLYQLLAVLGGVQL 321

Query: 323 WGFWGVFFAIP 333
            G  G   A P
Sbjct: 322 LGIVGAVIAPP 332