Pairwise Alignments

Query, 354 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., permease from Sinorhizobium meliloti 1021

 Score =  132 bits (331), Expect = 2e-35
 Identities = 92/326 (28%), Positives = 166/326 (50%), Gaps = 16/326 (4%)

Query: 24  ILLFGFIT-IYFFGHLIAPLLVAIVLAYLLEWPVTQLRRLRIPRTLAVIIVITVFTGLMI 82
           ++L GFI  +  F  ++ P L  + LAY L+    +L RL + R +A I ++  F  ++ 
Sbjct: 19  LVLVGFIAFLLVFSSILLPFLAGMALAYFLDPVADRLERLGLSRLMATIAILVAFVVVLA 78

Query: 83  LAVFGLVPTIWKQVGNLINDVPNMYNGTQKFIT-SLPERYPELAHLEIVESVIGNAKNKV 141
           L++  +VP +  Q    I  +P      Q+F+T S     P+    ++  + I     K+
Sbjct: 79  LSLMIIVPLVVTQAAEFIQKMPGYITRLQEFLTDSQSTLLPDWLAGQM--TTIKQNSAKL 136

Query: 142 LGMGESVVKGSLASLV---SLATLGVY--LILVPLLVFFLLKDKQEMLRMASGILPRNR- 195
           L  G S + G+L   +    LA L +    ++ P++ F+LL D   M+      +PR+  
Sbjct: 137 LEQGASFL-GTLFQQIWNSGLALLNILSLFVITPVVAFYLLLDWDRMVDRVDSWIPRDYV 195

Query: 196 KLANKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYSVLLAVAVGLSVLIPYI 255
           ++  ++  +MN  I+ ++RG+    +I+G    I   ++ L + +L+ +  G+   IPY+
Sbjct: 196 EVVRQIARDMNTTIAGFVRGQGSLCLILGLYYGIGLTMVGLNFGLLIGLFAGMISFIPYV 255

Query: 256 GAAAVTVPVAIVALFQWGLTPQFYTLLIAYGII---QALDGNVLVPVLFSEAVNLHPVAI 312
           G+    V    VAL Q+   P +  +L+   +    Q L+GN+L P L  ++V LHPV +
Sbjct: 256 GSLVGLVLALGVALVQFW--PDYVWILLVLAVFFSGQFLEGNILQPKLVGKSVGLHPVWL 313

Query: 313 IIAVLVFGGLWGFWGVFFAIPLATLV 338
           + A+L FG L+GF G+  A+P A  +
Sbjct: 314 MFALLAFGALFGFVGLLVAVPAAAAI 339