Pairwise Alignments

Query, 354 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 358 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 71.2 bits (173), Expect = 4e-17
 Identities = 76/319 (23%), Positives = 140/319 (43%), Gaps = 46/319 (14%)

Query: 38  LIAPLLVAIVLAYLLEWPVTQLRRLRIPRTLAVIIVI--TVFTGLMILAVFGLVPTIWKQ 95
           ++ P +++  +A +    ++ + R R+P+ LAV++++   V  GL +  +          
Sbjct: 34  IVVPFVLSAFIAVICNPVISWMMRFRVPKWLAVMLLMFFIVMLGLWLATL---------- 83

Query: 96  VGNLINDVPNMYNGTQKFITSLPERYPELAH-----LEIVESV-IGNAKNKVLGMGESVV 149
           VG+ IN+          F   LP    +L       LE ++++ I  +K +VL   +  +
Sbjct: 84  VGSSINE----------FSKQLPHYRDQLIQQFGWILEKLQTLNIRISKEQVLAYFDPGM 133

Query: 150 KGSLAS--LVSLATLGVYLILVPLLVFFLLKDKQEMLRMASGILPRNRKLANKVWEEMNQ 207
             S+ +  L  +  +   L L+ L + F+L + Q         LP+   LA    E   Q
Sbjct: 134 ALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQS--------LPKKVHLALDDPEMRLQ 185

Query: 208 QISNYIRG-------KVLEIVIVGTVSYITFAILDLRYSVLLAVAVGLSVLIPYIGAAAV 260
           QI  ++         K L  +  G V  I  A + + Y++L AV   L   IP IG+   
Sbjct: 186 QIDKFLHSVNQYMVIKTLVSLATGAVVGIGLAAIGVDYALLWAVIAFLFNYIPNIGSIIA 245

Query: 261 TVPVAIVALFQWGLTPQFYTLLIAYGIIQALDGNVLVPVLFSEAVNLHPVAIIIAVLVFG 320
            +P  ++A  Q G      T L+  G    + GNV+ P      + L  + + ++++ +G
Sbjct: 246 AIPAILLAFIQLGPAAAGGTALLYLGTNMVM-GNVIEPKFMGRGLGLSTLVVFLSLIFWG 304

Query: 321 GLWGFWGVFFAIPLATLVK 339
            L G  G+  ++PL  +VK
Sbjct: 305 WLLGSVGMLLSVPLTMIVK 323