Pairwise Alignments

Query, 354 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., putative permease from Phaeobacter inhibens DSM 17395

 Score =  132 bits (333), Expect = 1e-35
 Identities = 94/337 (27%), Positives = 176/337 (52%), Gaps = 24/337 (7%)

Query: 18  AASLVAILLFGFITIYFFGHLIAPLLVAIVLAYLLEWPVTQLRRLRIPRTLAVIIVITVF 77
           AA ++A++L+        G ++ P ++   +AYL++    +L  + + RT A   VITVF
Sbjct: 15  AAVVIAVVLWAL------GDVLLPFVLGAAIAYLIDPIADRLESMGLSRTAATA-VITVF 67

Query: 78  TGLMILAVF-GLVPTIWKQVGNLINDVPNMYNGTQKFITS-LPERYPELAHLE-IVESVI 134
             L+ + +   +VPT+  Q+ +L   +P  +   + F+    P  + E +  +  + S+ 
Sbjct: 68  AMLLFVVILLVVVPTLIYQMLDLAKVLPEAFKNLRDFVQQQAPSLFDEGSRAQQTIVSIA 127

Query: 135 GNAKNKVLGMGESVVKGSLASLVSLATLGVYLILVPLLVFFLLKDKQEMLRMASGILPRN 194
              ++K +G    V++G + S VSL  + +  ++VP++  +LL D   M+     +LPR+
Sbjct: 128 QTLQSKAIG----VLEGVVGSAVSLVNVLILFVIVPVVAVYLLLDWDRMVARIDELLPRD 183

Query: 195 -----RKLANKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYSVLLAVAVGLS 249
                R+LA ++    ++ ++++IRG     +I+GT   +   ++ L + + +    GL 
Sbjct: 184 HAPTIRELAARI----DKVLASFIRGMGTVCLILGTYYAVALMLVGLNFGLAVGFIAGLV 239

Query: 250 VLIPYIGAAAVTVPVAIVALFQ-WGLTPQFYTLLIAYGIIQALDGNVLVPVLFSEAVNLH 308
             IPY+GA    V    +ALFQ WG       +   + I Q ++GN L P L   +V LH
Sbjct: 240 TFIPYLGALIGGVLAIGLALFQFWGDWWSIGMVAGVFAIGQVIEGNFLTPKLVGNSVGLH 299

Query: 309 PVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKAL 345
           PV +++A+ VFG L+GF G+  A+P+A  +  + + L
Sbjct: 300 PVWLLLALSVFGALFGFVGMLIAVPVAAALGVIARFL 336