Pairwise Alignments

Query, 354 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., putative permease from Dechlorosoma suillum PS

 Score = 64.7 bits (156), Expect = 4e-15
 Identities = 54/244 (22%), Positives = 113/244 (46%), Gaps = 11/244 (4%)

Query: 114 ITSLPERYPELAHLEIVESVIGNAKNKVLGMGESVVKGSLASLVSLATLGV-YLILVPLL 172
           ++SL   +  LA   + +SV    +  +     + V  +LA  V LA   +  L+L P L
Sbjct: 120 LSSLENSFEFLAQAHLTDSV----RKGISDFSANFVSRNLAGAVMLAAAWLPSLLLAPFL 175

Query: 173 VFFLLKDKQEMLRMASGILPRNRKLANKVW--EEMNQQISNYIRGKVLEIVIVGTVSY-I 229
            FF L+D +   +     +P N  L   ++  +E+++    Y  G +L++ ++ T++  +
Sbjct: 176 AFFFLRDGRRFKKFIIHAVP-NAFLERTLYLLDEVDRTARMYFTG-LLKLTLLDTLTLAL 233

Query: 230 TFAILDLRYSVLLAVAVGLSVLIPYIGAAAVTVPVAIVALFQWGLTPQF-YTLLIAYGII 288
               L +    LL +   +   +PY+G+      V +VA   +   P   Y  +  + ++
Sbjct: 234 GLWALGISAPFLLGLVTAVLAWVPYVGSILGCALVVLVAATDFPGNPGMAYGAIGLFILV 293

Query: 289 QALDGNVLVPVLFSEAVNLHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVKAVWKALPSI 348
           + LD    +P+    +++LHP+  +I + V G + G  G+   +PL  +V  + + +  +
Sbjct: 294 RLLDDFFFMPMTVGRSLHLHPLLTVIMIFVGGAVAGISGLMLVLPLLGVVMVLGETVGQV 353

Query: 349 DEEP 352
             +P
Sbjct: 354 VNDP 357



 Score = 26.9 bits (58), Expect = 9e-04
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 6/54 (11%)

Query: 55  PVTQLRRLRIPRTLAVIIV-----ITVFTGLM-ILAVFGLVPTIWKQVGNLIND 102
           P+T  R L +   L VI++     +   +GLM +L + G+V  + + VG ++ND
Sbjct: 303 PMTVGRSLHLHPLLTVIMIFVGGAVAGISGLMLVLPLLGVVMVLGETVGQVVND 356