Pairwise Alignments

Query, 354 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 67/333 (20%), Positives = 147/333 (44%), Gaps = 21/333 (6%)

Query: 14  SDPHAASLVAILLFGFITIYFFG-----HLIAPLLVAIVLAYLLEWPVTQLRRLRIPRTL 68
           S+  +A+     +  F+ I   G      ++ P +++  +A +    +  + + R+P+ L
Sbjct: 4   SNTPSAAYKGFAVMAFVVIILAGIKAASPIVVPFVLSSFIAVICNPAIGLMTKYRVPKWL 63

Query: 69  AVIIVITVFTGLMILAVFGLVPTIWKQVGNLINDVPNMYNGTQKFITSLPERYPELAHLE 128
           AVI+++    G ++L    L   +   +      +P       ++   L E++  + H +
Sbjct: 64  AVILLM----GFIVLMGLWLASLVGSSINEFSKQLP-------QYRDQLVEQFSWVLH-K 111

Query: 129 IVESVIGNAKNKVLGMGESVVKGSLAS--LVSLATLGVYLILVPLLVFFLLKDKQEMLRM 186
           +    I  +K +VL   +  +  S+ +  L  +  +   L L+ L + F+L + Q + + 
Sbjct: 112 LQALNIQISKEQVLAYFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLPKK 171

Query: 187 ASGILPRNRKLANKVWEEMNQQISNYIRGKVLEIVIVGTVSYITFAILDLRYSVLLAVAV 246
               L        ++ +   Q ++ Y+  K L  +  G +  +  A++ + Y++L AV  
Sbjct: 172 LHLALDDPDMRLQQI-DRFLQSVNQYMVIKTLVSLATGLIVGVGLAVIGVDYALLWAVIA 230

Query: 247 GLSVLIPYIGAAAVTVPVAIVALFQWGLTPQFYTLLIAYGIIQALDGNVLVPVLFSEAVN 306
            L   IP IG+    +P  ++A  Q G      T L+ Y     + GN++ P      + 
Sbjct: 231 FLFNYIPNIGSIIAAIPAVLLAFIQLGPAAAGGTALL-YVAANMVMGNLVEPKFMGRGLG 289

Query: 307 LHPVAIIIAVLVFGGLWGFWGVFFAIPLATLVK 339
           L  + + ++++ +G L G  G+  ++PL  +VK
Sbjct: 290 LSTLVVFLSLIFWGWLLGSVGMLLSVPLTMVVK 322