Pairwise Alignments

Query, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  243 bits (619), Expect = 2e-68
 Identities = 166/477 (34%), Positives = 252/477 (52%), Gaps = 34/477 (7%)

Query: 177 QLAQLVNSVNLFDAGYLFITTKDGVTIAHPNAENN-GEKFSQFL-PN-VDLKEGTQRIEL 233
           Q  +L+++++    GY F    + + +   N+ +  G+ F     PN V +     ++  
Sbjct: 83  QAIKLLSNISYGKDGYFFGYDSETIRLFKANSPDGVGKSFKDNRDPNGVYVNRDLVKVAK 142

Query: 234 DGKYYLVKFAQVPSES--------------WYI---------GAVVDESIAFAMVDDLRH 270
           DG +YL   + +P                 W +         G     ++  A V D R 
Sbjct: 143 DGTHYLEYSSPLPGSQDLVPKLGYTEYLSKWDLAVGSSVNLDGIEAQVALVEAKVHD-RV 201

Query: 271 SSLIYTVIGV------LLSIIGLSFLIKVLMKPLGALSRAIEDVASGQGDLTKRLDTNTD 324
             +I +++G+      +++++GL  L   +++PL  +   ++D+A+G+GDLT+RL   + 
Sbjct: 202 QGVILSIVGIAAVVLLVIAVVGL-LLANAILRPLHLMKDNLDDIAAGEGDLTRRLTITSQ 260

Query: 325 MEFAILAKDFNVFCETLQKRIQHLKGIGAEIMHGTEQTVLGAHESASAMAQQLQELEQLA 384
            E   LA  FN F + +   ++ +  + +++     Q    A  S  AM +Q  E +Q+A
Sbjct: 261 DELGQLAGSFNRFVDKIHGLVRQITDMTSQLTGLVTQVSEQAQRSEQAMERQRHETDQVA 320

Query: 385 TAMHEMAVTATEVANNAQGAAAAAHEADEASQDGSKVVSDTTRSIDALSARIEQAVEEVK 444
           TA++EM+  A EVA +AQGAA AA + DE  Q   +VV+ + + I AL   I  +   + 
Sbjct: 321 TAINEMSSAAQEVARSAQGAAVAAQQTDEEGQSAKRVVAGSIQQIHALVNDIRSSGVSLD 380

Query: 445 GLEVATGNIETILKVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQ 504
            L+    +I ++L VI  IA+QTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQQ
Sbjct: 381 SLQQDVASIVSVLGVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQ 440

Query: 505 STTEIRNMIEQLQSGASAVSAAMNESKYTADDAVQKAQLANESLQRIRGAIQRISDMNMQ 564
           ST EI+ MI++LQSG  A   AM  S    D   ++A  A  SL  +   I  I+ MN Q
Sbjct: 441 STQEIQGMIDRLQSGTHAAVEAMRRSSEAGDGTSERANEAGASLDTMAQLIGTINSMNAQ 500

Query: 565 IASAAEEQSLVAEEINTNTVKIKDLSTQVADSAKSASMAMEVQTENVREQGKLLNTF 621
           IASAAEEQ+ VAEEIN +  +I      VAD  +  +       +  +  GKL+  F
Sbjct: 501 IASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRSLADLGQRLGKLVGQF 557