Pairwise Alignments

Query, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  218 bits (554), Expect = 7e-61
 Identities = 137/340 (40%), Positives = 193/340 (56%), Gaps = 7/340 (2%)

Query: 269 RHSSLIYTVIGVLLSIIGLSFLIKVLM-----KPLGALSRAIEDVASGQGDLTKRLDTNT 323
           ++SS    V+ +LL   GL+ L   L+     KP+     A E++A  +G+LT+ +  + 
Sbjct: 179 QYSSAFNWVVTLLLIATGLTLLFAWLLTNSITKPIANALDAAEEIA--KGNLTRPITVDG 236

Query: 324 DMEFAILAKDFNVFCETLQKRIQHLKGIGAEIMHGTEQTVLGAHESASAMAQQLQELEQL 383
             E   L +  +   E L+  +Q + G   ++    E+      ESA  + QQ  E+EQ 
Sbjct: 237 SDEAGRLLRAMSTMQEKLRDTLQRISGSATQLASAAEELNSVTDESARGLTQQNNEIEQA 296

Query: 384 ATAMHEMAVTATEVANNAQGAAAAAHEADEASQDGSKVVSDTTRSIDALSARIEQAVEEV 443
           ATA++EM     EVA NA   + A+  A  ++ DG  +V +T  +I+ +SA ++     +
Sbjct: 297 ATAVNEMTSAVEEVARNAVSTSEASKNATTSAGDGRDLVQETVSAIERMSADVQSTAALI 356

Query: 444 KGLEVATGNIETILKVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQ 503
             L   + +I  +L VI  +ADQTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQ
Sbjct: 357 GNLADESRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQ 416

Query: 504 QSTTEIRNMIEQLQSGASAVSAAMNESKYTADDAVQKAQLANESLQRIRGAIQRISDMNM 563
           QST+EI  MI  +QSG      +M  S   A+  +  A+ A  SL  I  AI  I++ N+
Sbjct: 417 QSTSEIERMIGSIQSGTEHAVDSMRNSTERAESTLNIARGAGMSLDTINTAIVEINERNL 476

Query: 564 QIASAAEEQSLVAEEINTNTVKIKDLSTQVADSAKSASMA 603
            IASAAEEQ+ VA E++ N V I+DLS Q A  A   S A
Sbjct: 477 VIASAAEEQAQVAREVDRNLVNIRDLSVQSATGANQTSAA 516



 Score = 37.7 bits (86), Expect = 1e-06
 Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 7/146 (4%)

Query: 391 AVTATEVANNAQGAAAAAHEADEASQDGSKVVSDTTRSIDALSARIEQAVEEVKGLEVAT 450
           A+ A       +G A  A E    +    +  S+  R I ++ +  E AV+ ++    +T
Sbjct: 388 AIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMIGSIQSGTEHAVDSMRN---ST 444

Query: 451 GNIETILKVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIR 510
              E+ L +        +L  +N AI      E     A  A+E   +A+   ++   IR
Sbjct: 445 ERAESTLNIARGAG--MSLDTINTAI--VEINERNLVIASAAEEQAQVAREVDRNLVNIR 500

Query: 511 NMIEQLQSGASAVSAAMNESKYTADD 536
           ++  Q  +GA+  SAA  E    A D
Sbjct: 501 DLSVQSATGANQTSAASAELSRLAVD 526



 Score = 34.3 bits (77), Expect = 1e-05
 Identities = 21/77 (27%), Positives = 38/77 (49%)

Query: 534 ADDAVQKAQLANESLQRIRGAIQRISDMNMQIASAAEEQSLVAEEINTNTVKIKDLSTQV 593
           +D+A +  +  +   +++R  +QRIS    Q+ASAAEE + V +E      +  +   Q 
Sbjct: 237 SDEAGRLLRAMSTMQEKLRDTLQRISGSATQLASAAEELNSVTDESARGLTQQNNEIEQA 296

Query: 594 ADSAKSASMAMEVQTEN 610
           A +    + A+E    N
Sbjct: 297 ATAVNEMTSAVEEVARN 313