Pairwise Alignments

Query, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  273 bits (698), Expect = 2e-77
 Identities = 218/710 (30%), Positives = 354/710 (49%), Gaps = 100/710 (14%)

Query: 7   IVAASSALLLCVIALLSFQQL-----------STVREEIESLVQDSLMEMVKG----VKN 51
           + A + A++L V+  L    L              + + E L++  L  + +     ++ 
Sbjct: 10  VAALAGAIVLSVVGALVLYSLFAGARTQEMVQQRTKAQFEQLIEQRLTALARTQASLIQR 69

Query: 52  TIESDLASKKGLAQSTTEILQLDPTN-------------KAFAKSVLESPNLKGSFLAIG 98
            +E+ L   +GLA S   ++ ++ T+                 ++V+ +P + G+++A  
Sbjct: 70  ELEAPLLLARGLATSNA-LMGMNGTDGNPQLKVPREQMISLLRETVVRNPKILGAYIA-- 126

Query: 99  LGYESDATVVENDD---------GWEPNADYDP--------------------------- 122
             +E +A  +++DD         G E N  + P                           
Sbjct: 127 --WEPNA--IDHDDANYVNRQVVGMETNGRFLPWWFRNQDGSLGLEKLADVTDQKLLSTG 182

Query: 123 -RKRPWYVDAKRERKLVVTEP--YVDISTKKIIISIGTPVYQQSNFVGAMFYDVELTQLA 179
            R   +Y+ ++  +K  V +P  Y   ST  ++ S   P+     F G +  D+ +  + 
Sbjct: 183 IRASEYYLCSQDSKKACVIDPAPYRVGSTMTMLASFIEPIMIDGQFQGIVGADLSVNFIQ 242

Query: 180 QLVNSVN--LFD-AGYLFITTKDGVTIAHPNAENN-GEKFSQFLPN------VDLKEGTQ 229
            ++ + +  L+D AG + + + +   +A     +  GEK S  L          L +G  
Sbjct: 243 DMLVAADGKLYDGAGEMALLSSNNRLVAFTKDPSKLGEKASDLLDASALDNLAKLGDGEV 302

Query: 230 RIELDGKY-----YLVKFAQVPSESWYI------GAVVDESIAFAMVDDLRHSSLIY--T 276
           R ++D  +     Y+       +  W +       AV+ +  A     D +  + I+   
Sbjct: 303 RYDIDEAHGHIEVYMPFGIGETNARWTLMLQLPLNAVMADLQALQKDLDHQRQADIFGMA 362

Query: 277 VIGVLLSIIGLSFLIKV---LMKPLGALSRAIEDVASGQGDLTKRLDTNTDMEFAILAKD 333
           ++G++++ IGL  +  V   + +PL  +   ++D+A G+GDLT+RL ++   E   +A+ 
Sbjct: 363 IVGLVIAGIGLLVIWLVGHGIARPLKQMVAMLDDIAQGEGDLTRRLVSDRADELGAIARG 422

Query: 334 FNVFCETLQKRIQHLKGIGAEIMHGTEQTVLGAHESASAMAQQLQELEQLATAMHEMAVT 393
           FN F   LQ  I  +      +   +E T   A  +   + +Q+ E++Q+ATA+HEM  T
Sbjct: 423 FNTFLSKLQGMITQVVTSVQSVSDSSEHTADIAIRTNQGVHKQMSEIDQVATAVHEMTAT 482

Query: 394 ATEVANNAQGAAAAAHEADEASQDGSKVVSDTTRSIDALSARIEQAVEEVKGLEVATGNI 453
           A +VA NA  AA AA  AD+A+  G ++V DT+ SI AL+  I +AV  V+ L   + NI
Sbjct: 483 AQDVARNATQAAQAASHADQAASQGMQIVRDTSTSIGALAVEIGKAVGVVQTLAKDSENI 542

Query: 454 ETILKVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMI 513
             IL  I  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LAQ+TQQ+T EI+ MI
Sbjct: 543 NAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATEEIQTMI 602

Query: 514 EQLQSGASAVSAAMNESKYTADDAVQKAQLANESLQRIRGAIQRISDMNMQIASAAEEQS 573
           +QLQ G   V   M +S+   D++VQ A  A ++L+ I  A+  I+DMN QIASAAEEQS
Sbjct: 603 QQLQQGTRDVVRVMEDSQTRTDESVQHAAKAAQALETITQAVSVINDMNTQIASAAEEQS 662

Query: 574 LVAEEINTNTVKIKDLSTQVADSAKSASMAMEVQTENVREQGKLLNTFIV 623
            VA++IN N + I  ++ +VA  A  +S A    T+   +Q +L+N F V
Sbjct: 663 AVADDINRNVINIGQVANEVASGADESSAASAGLTKLAEQQRRLINQFRV 712