Pairwise Alignments

Query, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 612 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  247 bits (631), Expect = 9e-70
 Identities = 177/583 (30%), Positives = 291/583 (49%), Gaps = 29/583 (4%)

Query: 31  REEIESLVQDSLMEMVKGVKNTIESDLASKKGLAQSTTEILQLDPTNKAFAKSVLESPNL 90
           ++ ++ +  D +   V  +KN    D AS+  L  +  ++++       FA      P+ 
Sbjct: 23  QQNVDQMATDPVYVSVGALKNYQTGDAASRP-LPPAAQQLIE------RFAHYGAAHPS- 74

Query: 91  KGSFLAIGLGYESDATVVENDDGWEPN-ADYDPRKRPWYVDAKRERKLVVTEP-----YV 144
             + L+IGL    D +  +  D  +P  A+YDPR RPWY  A       V  P     Y 
Sbjct: 75  -AAILSIGL---EDGSYAKWPD--DPQLANYDPRSRPWYKAAMASPGKTVRTPAFYPAYD 128

Query: 145 DISTKKIIISIGTPVYQQSNFV-GAMFYDVELTQLAQLVNSVNLFDAGYLFITTKDGVTI 203
                  ++     +      V G +  +V L  L +LV S+ L ++GY+ +  +DG+ +
Sbjct: 129 YGKEDAALVGTARAMITSDGIVKGVLAVNVSLKNLTELVKSIKLGESGYVMLI-EDGIVL 187

Query: 204 AHPNAENNGEK-----FSQFLPNVDLKEGTQRIELDGKYYLVKFAQVPSESW-YIGAVVD 257
             P    +  K      + +     + +G+  +EL+G  Y+      P   W YIG +  
Sbjct: 188 VDPRDTTHSFKPLKDLGAAYAKLATIPQGSTEVELNGIPYMANVWTSPDLGWRYIGLIER 247

Query: 258 ESIAFAMVDDLRHSSLIYTVIGVLLSIIGLSFLIKVLMKPLGALSRAIEDVASGQGDLTK 317
             +  A       ++LI   + V+ +++ ++F  K ++KP+  +S  ++ +A G+GDL +
Sbjct: 248 SEVMSAATRMTYLTTLIVGGLTVIFALVAVAFS-KSIVKPISQVSTGLQSIAQGEGDLRR 306

Query: 318 RLDTNTDMEFAILAKDFNVFCETLQKRIQHLKGIGAEIMHGTEQTVLGAHESASAMAQQL 377
            L+   + E A LA  FN F   +++ IQH+    + + + +      A+    A  +Q 
Sbjct: 307 ELEFQGNDETAELAGWFNKFLSAIRQLIQHIGAASSNLQNASRVNSEVANNMNEAAGRQR 366

Query: 378 QELEQLATAMHEMAVTATEVANNAQGAAAAAHEADEASQDGSKVVSDTTRSIDALSARIE 437
           + +E ++TA +EM  TA EVA +  GAA +A        +G + +  TT +++ L  R+ 
Sbjct: 367 EAVELVSTAFNEMVATANEVARSCSGAAESAENGHRRVAEGKQQIEITTDNVNRLGRRLT 426

Query: 438 QAVEEVKGLEVATGNIETILKVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRT 497
           ++ + +  LE  + +I  IL  I  IA+QTNLLALNAAIEAARAG+ GRGFAVVADEVR 
Sbjct: 427 ESSQSMTELEAGSRSINQILGTIRAIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRA 486

Query: 498 LAQRTQQSTTEIRNMIEQLQSGASAVSAAMNESKYTADDAVQKAQLANESLQRIRGAIQR 557
           LA+RT  ST EI  ++  L S    V   M      +  +V   +   +S + I+ ++  
Sbjct: 487 LAKRTSDSTGEIEQLLGALGSKTQEVMGKMGSCLELSHASVSSIESTRDSFEGIQLSVNE 546

Query: 558 ISDMNMQIASAAEEQSLVAEEINTNTVKIKDLSTQVADSAKSA 600
           I D N+QI++AAEEQ  VAEEIN +  +I D +  V   A SA
Sbjct: 547 IRDQNLQISAAAEEQHSVAEEINRHIQQIYDEARLVESLANSA 589