Pairwise Alignments

Query, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  348 bits (892), Expect = e-100
 Identities = 216/630 (34%), Positives = 349/630 (55%), Gaps = 16/630 (2%)

Query: 1   MRFSQKIVAASSALLLCVIALLSFQQLSTVREEIESLVQDSLMEMVKGVKNTIESDLASK 60
           ++FS KI+ A+S +++   +L +       R  I   +   L EM     + I++ L+ +
Sbjct: 5   LKFSHKILLAASLIVIATFSLFTLFNDYLQRNAIRDNLNSYLDEMGDVTAHNIQNWLSGR 64

Query: 61  KGLAQSTTEILQLDPTNKAFAKSVLESPNLKGSFLAIGLGYESDATVVENDDGWEPNADY 120
             L +S  + +  D      A+ +LE   L  +F+   LG +  + ++   +  E  ADY
Sbjct: 65  ILLVESAAQSIGSDDAEARVAE-LLEQKALASTFMFSYLGGQDGSFLMRPAE--EMPADY 121

Query: 121 DPRKRPWYVDAKRERKLVVTEPYVDISTKKIIISIGTPVYQQSNFVGAMFYDVELTQLAQ 180
           DPR RPWY DA       +TEPYVD ++ +++ISI TP  Q    +G +  D+ L  L +
Sbjct: 122 DPRARPWYKDAIAAGGSTLTEPYVDAASGELVISIATPAQQNGRNIGVVGGDLGLKVLVE 181

Query: 181 LVNSVNLFDAGYLFITTKDGVTIAHPNA----ENNGEKFSQFLPNVDLKEGTQRIELDGK 236
           ++N+++    G+ F+ + DG  + HP+     ++ GE F    P++D        ELDG+
Sbjct: 182 IINALDFNGMGHAFLVSGDGKILVHPDGSKVMKSLGELFPGHTPSLDANYS--EAELDGQ 239

Query: 237 YYLVKFAQV---PSESWYIGAVVDESIAFAMVDDLRHSSLI--YTVIGVLLSIIGLSFLI 291
             ++ F++V   PS SWY+G  +D++ A+A +   R S+++   T +GV+L ++G+  L+
Sbjct: 240 TRILSFSRVQGLPSVSWYVGISLDKAKAYAALASFRTSAVVAALTAVGVILLLLGM--LM 297

Query: 292 KVLMKPLGALSRAIEDVASGQGDLTKRLDTNTDMEFAILAKDFNVFCETLQKRIQHLKGI 351
           +VLM+PL  + RA+ ++A G+GDLT+RL   +  EF  LA  FN F E +   I+ +   
Sbjct: 298 RVLMRPLTDMGRAMANIAEGEGDLTRRLAVQSKDEFGELASAFNRFVERIHTSIREVSSA 357

Query: 352 GAEIMHGTEQTVLGAHESASAMAQQLQELEQLATAMHEMAVTATEVANNAQGAAAAAHEA 411
             ++     + +  ++ S +   +Q      +A A++E+   A E+A NA  A+  A  A
Sbjct: 358 TQQVNEVAARVLAASNSSMANSDEQASRTNSVAAAINELGAAAQEIARNAADASQQASGA 417

Query: 412 DEASQDGSKVVSDTTRSIDALSARIEQAVEEVKGLEVATGNIETILKVINDIADQTNLLA 471
              ++DG +VV     ++  LSA+I  +  +++ L   T +I  IL+VI  I++QTNLLA
Sbjct: 418 RHQAEDGRQVVEQNIAAMRELSAKISASCAQIEALNAKTVDIGQILEVIKGISEQTNLLA 477

Query: 472 LNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNESK 531
           LNAAIEAARAGE+GRGFAVVADEVR LA RTQ S  EI+ MIEQLQ GA A    M ES+
Sbjct: 478 LNAAIEAARAGEAGRGFAVVADEVRNLAHRTQSSAQEIQQMIEQLQVGAGASVQTMTESQ 537

Query: 532 YTADDAVQKAQLANESLQRIRGAIQRISDMNMQIASAAEEQSLVAEEINTNTVKIKDLST 591
             ++ +V  A  A E L  +   I  I  MN  +A+A EEQ+ V E +N +  +I  L+ 
Sbjct: 538 RQSESSVSIADRAGERLGEVTQRIGEIDGMNQSVATATEEQTAVIESLNMDITEINTLNQ 597

Query: 592 QVADSAKSASMAMEVQTENVREQGKLLNTF 621
           Q  ++ +S   A     +  R   +L+++F
Sbjct: 598 QGVENLQSTLRACGDLDQQARRLKQLVDSF 627