Pairwise Alignments

Query, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 707 a.a., chemoreceptor methyl-accepting chemotaxis transmembrane protein from Sinorhizobium meliloti 1021

 Score =  224 bits (572), Expect = 8e-63
 Identities = 192/668 (28%), Positives = 301/668 (45%), Gaps = 109/668 (16%)

Query: 6   KIVAASSALLLCVIALLSFQ----QLSTVREEIESLVQDSLMEMVKGVKNTIESDLASKK 61
           +I+ A+S +++   A  S      Q +T  + +E  +  S  +  + V N +   +    
Sbjct: 19  RILVAASCVVVGAFAGFSVYIDSLQRATTTKAVEEDIASSGNQAAQSVANWLNGRVTLTA 78

Query: 62  GLAQSTTEILQLDPTNKAFAKSVLESPNLKGSFLAIGLGYESDATVVENDDGWEPNADYD 121
             A +  ++      ++A   SVL++  L G F++  +G ES   ++  D        YD
Sbjct: 79  MAADAAGQV-----ADEAAIGSVLKNDVLTGEFISTYVGNESGQFMIWPDSKMPDG--YD 131

Query: 122 PRKRPWYVDAKRERKLVVTEPYVDISTKKIIISIGTPVYQQSNFVGAMFYDVELTQLAQL 181
           PR+RPWY  A +    V+TEPYVD S+  +IIS   PV  +    G    D  L  L  +
Sbjct: 132 PRQRPWYQQAVKADARVLTEPYVDASSGDLIISAAVPVKHEGKLYGVTGSDFSLKALVSM 191

Query: 182 VNSVNLFDAGYLFITTKDGVTIAHPNAENNGEKFSQFLPNVD---LKEGTQRIELDGKYY 238
           VN +++   G+ F+  KDG  + HPNA+   +  +   P VD   +  G    ELDGK  
Sbjct: 192 VNGIDVGGEGFAFLANKDGQILVHPNAKLVTKTLADAFP-VDPPAIGTGIMHTELDGKPM 250

Query: 239 LVKFAQV---PSESWYIGAVVDESIAFAMVDDLRHSSLIYTVIGVLLSIIGLSFLI-KVL 294
           LV F  V   PS  WY+G  +D  +A++ +   R ++ I T++ V   I  L+ L+ +++
Sbjct: 251 LVSFVPVKGLPSVEWYVGFALDADVAYSAISQFRVAATIATILAVGAMIAFLATLLSRLV 310

Query: 295 MKPLGALSRAIEDVASGQGDLT----KRLDTNTDMEFAILAKDFNVF------------- 337
           ++P+  ++ A+E +A+G  D+T    +R D    M  A+     N               
Sbjct: 311 IRPVTDMTGAMEKLAAGSLDVTIPGEERRDQIGSMAAAVAVFRANAVERKRLEDEADSNR 370

Query: 338 ----CETLQKRIQHLKGIGAEIMHGTEQTVLG---------AHESASAMAQQLQEL-EQL 383
                E L++  Q  +   AE+ H  +    G         A+   S  A +L  L E  
Sbjct: 371 SLSERERLEREAQKTRD-AAEVQHAVDALATGLGRLADGDLAYRIGSPFADRLDRLREDF 429

Query: 384 ATAMHEMAVTATEVANNAQGAAAAAHEADEASQDGSKVVSDTTRSIDALSARIEQ----- 438
             ++ ++  T   V  NA+   A A E   A+ D ++       S++  +A +E+     
Sbjct: 430 NNSVAKLHDTLCAVGANARAIDAGATEIRSAADDLARRTEQQAASVEETAAALEEITTTV 489

Query: 439 ------------------------------AVEEVKGLEVATGNIETILKVINDIADQTN 468
                                         AVE +  +E ++G I  I+ VI+DIA QTN
Sbjct: 490 RDSAHRAEEVGALVARTRAGAEKSGEVVQNAVEAMHAIEKSSGEISNIIGVIDDIAFQTN 549

Query: 469 LLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMI----EQLQSGASAVS 524
           LLALNA +EAARAGE+G+GFAVVA EVR LAQR+  +  EI+ +I    EQ+ SG + V 
Sbjct: 550 LLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSANAAKEIKALITTSGEQVHSGVTLVG 609

Query: 525 AAMNESKYTADDAVQKAQLANESLQRIRGAIQRISDMNMQIASAAEEQSLVAEEINTNTV 584
                                 +LQ I   +Q I+     I +A  EQS   +EINT  V
Sbjct: 610 D------------------TGRALQAIVAEVQEINKHVSAIVTATREQSTGLQEINT-AV 650

Query: 585 KIKDLSTQ 592
              D  TQ
Sbjct: 651 NTMDQGTQ 658