Pairwise Alignments

Query, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  213 bits (542), Expect = 2e-59
 Identities = 134/376 (35%), Positives = 216/376 (57%), Gaps = 4/376 (1%)

Query: 250 WYIGA--VVDESIAFAMVDDLRHSSLIYTVIGVLLSIIGLSFLIKVLMKPLGALSRAIED 307
           W +G    VD+  A       ++  +   V G ++++  L  + + + +PL     A ++
Sbjct: 181 WIVGTGIYVDDIAAQKQEFTWQYLLVFLLVWGPVMAL--LLMISRSVTEPLQRTLMAFKN 238

Query: 308 VASGQGDLTKRLDTNTDMEFAILAKDFNVFCETLQKRIQHLKGIGAEIMHGTEQTVLGAH 367
           +A G+ +LT RL+     E + ++  FN F   +Q  +  ++         +      AH
Sbjct: 239 IAEGEANLTLRLEERGRDELSQVSVYFNAFVGRIQSLVISVRDSVDHSRQLSSSLSNVAH 298

Query: 368 ESASAMAQQLQELEQLATAMHEMAVTATEVANNAQGAAAAAHEADEASQDGSKVVSDTTR 427
           ++A A     QE + +A A+++M+ TA+EVA NAQ AA +A  AD  +   + VV+    
Sbjct: 299 QAAHATNSMQQETQSVAAAINQMSATASEVAANAQLAAKSAKNADSQADSTNLVVTHAMG 358

Query: 428 SIDALSARIEQAVEEVKGLEVATGNIETILKVINDIADQTNLLALNAAIEAARAGESGRG 487
           ++  LS+ +E+  E  K L+V++G I  IL VI  IA+QTNLLALNAAIEAARAGE+GRG
Sbjct: 359 NVRQLSSELEETSEIAKALKVSSGEIGQILDVIVGIAEQTNLLALNAAIEAARAGEAGRG 418

Query: 488 FAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNESKYTADDAVQKAQLANES 547
           FAVVADEVRTLA RTQQST EI  +IE ++     V+A++  ++  +D+ V +     ++
Sbjct: 419 FAVVADEVRTLASRTQQSTQEINAIIEAIRGAVDKVNASVARARQQSDNTVDETAQVMDA 478

Query: 548 LQRIRGAIQRISDMNMQIASAAEEQSLVAEEINTNTVKIKDLSTQVADSAKSASMAMEVQ 607
           L  I+ AI +I+DMN+QIA+A +EQS V  E+N N  +I ++S +    +++     +  
Sbjct: 479 LGLIKQAIGQINDMNLQIATATDEQSAVIAELNENINRINEISVENLSKSETVGHTSDRI 538

Query: 608 TENVREQGKLLNTFIV 623
            E+ R+  +L+  F V
Sbjct: 539 AEDSRQMAQLIAVFKV 554