Pairwise Alignments

Query, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., methyl-accepting chemotaxis sensory transducer with Cache sensor from Paraburkholderia bryophila 376MFSha3.1

 Score =  224 bits (570), Expect = 1e-62
 Identities = 170/610 (27%), Positives = 288/610 (47%), Gaps = 45/610 (7%)

Query: 6   KIVAASSALLLCVIALLSFQQLSTVREEIESLVQDSLMEMVKGVKNTIESDLASKKGLAQ 65
           +IVA   A+++  +A  +              +  SL  +  G    I   +A+   +  
Sbjct: 8   RIVALCVAIVVAALAANAVLNYVVANSYNADAIDSSLTAVESGHAAGISDWVAANSQMID 67

Query: 66  STTE-ILQLDPTNKAFAKSVLESPNLKGSFLAIGLGYESDATVVENDDGWEPNADYDPRK 124
           S    +LQ DP+        L+     G F  + +GY +D T   +D    P ADYDP  
Sbjct: 68  SLQNAVLQPDPS------PALQQIATAGKFTNVYVGY-ADKTAKFSDPTGIP-ADYDPTG 119

Query: 125 RPWYVDAKRERKLVVTEPYVDISTKKIIISIGTPVYQQSNFVGAMFYDVELTQLAQLVNS 184
           RPWY  A    K V T PYVD+ + K++++   PV +     G +  DV +  +   V S
Sbjct: 120 RPWYKQAVAAGKPVATPPYVDVGSGKLVVAFAAPVVRDGAVKGVVSGDVAMDSVIANVKS 179

Query: 185 VNLFDAGYLFITTKDGVTIAHPNAENNGEKFSQFLPNVD------LKEGTQRIELD--GK 236
           ++   A +  +    G  +AHP+ +   +  S  +P +       L    + +++D  G 
Sbjct: 180 IHPTPASFGMLIDASGNIVAHPDPKLTLKPVSDLVPGLAGDKLAALFSAQRPVQMDVSGS 239

Query: 237 YYLVKFAQVPSESWYIGAVVDESIAFAMVDDLRHSSLIYTVIGVLLSIIGLSFLIKVLMK 296
             L++   +P  +WY+   +D++ A A +  L  +S+I  ++   ++   ++ +  V  +
Sbjct: 240 PKLLRAQSIPGTNWYVVVALDKAEATAGMRSLLTASVIALIVIAGIAAAVVAAVTAVSFQ 299

Query: 297 PLGALSRAIEDVASGQGDLTKRLDTNTDMEFAILAKDFNVFCETLQKRIQHLKGIGAEIM 356
            L  +  A++D+ SG+GDLT+RL    + E A +A+ FN F       I  L  +  +I 
Sbjct: 300 RLSKVRDAMDDIGSGEGDLTQRLPAVGNDEVAQIARSFNTF-------IDKLSHVMRQIR 352

Query: 357 HGTEQTVLGAHESASAMAQQLQELEQLATAMHEMAVTATEVANNAQGAAAAAHEADEASQ 416
             +E   + A+E A+         E  A ++ E A +  E+ +    +A+AA +AD  + 
Sbjct: 353 DASESVRVAANEIAAGNVDLSGRTESAAASLQETAASMEEITSTVTQSASAAKQADTTAV 412

Query: 417 DGSKVVSDTTRSIDALSARIEQAVEEVKGLEVATGNIETILKVINDIADQTNLLALNAAI 476
             S+V S            I + +  +  +E A+  I  I+ VI+ IA QTN+LALNAA+
Sbjct: 413 SASQVASRG-------GVVISEVITTMGEIEHASVKISDIIGVIDGIAFQTNILALNAAV 465

Query: 477 EAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNESKYTADD 536
           EAARAGE GRGFAVVA EVR+LAQR+ Q+  EI+ +IE   +  S+ S  + ++  T  +
Sbjct: 466 EAARAGEQGRGFAVVAGEVRSLAQRSAQAAKEIKALIEATVASVSSGSGQVRQAGETMTE 525

Query: 537 AVQK-----------AQLANE---SLQRIRGAIQRISDMNMQIASAAEEQSLVAEEINTN 582
            V              Q ANE    +Q +  A+ ++ +M  Q A+  E+ +  A  + + 
Sbjct: 526 IVSNVANVTTIISEITQAANEQTRGIQEVNRAVSQLDEMVQQNAALVEQSTAAAAALQSQ 585

Query: 583 TVKIKDLSTQ 592
            V +    TQ
Sbjct: 586 AVSLASAVTQ 595