Pairwise Alignments

Query, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 623 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  327 bits (838), Expect = 9e-94
 Identities = 208/629 (33%), Positives = 344/629 (54%), Gaps = 23/629 (3%)

Query: 5   QKIVAASSALLLCVIALLSFQQLSTVREEIESLVQDSLMEMVKGVKNTIESDLASKKGLA 64
           QKI+ +    L  VI+LLS+Q  S+ +  +     + +  + +     I+  LA ++ + 
Sbjct: 8   QKILISVVIALSLVISLLSWQSYSSQKSLLLQNSLEQVQRLGEQQAERIQEWLAGRQDIV 67

Query: 65  QSTTEILQLDPTNKAFAKSVLESPNLKGSFLAIGLGYESDATVVENDDGWEPNADYDPRK 124
            +    ++ +      + S L+     G F     G E+   ++++D   +    YDPR 
Sbjct: 68  GALASKVEDN------SLSALQQAQASGRFQLTYYGTET-GQMLDSDPSID-RTGYDPRT 119

Query: 125 RPWYVDAKRERKLVVTEPYVDISTKKIIISIGTPVYQQSNFVGAMFYDVELTQLAQLVNS 184
           RPWY  A  ER L++T+PYVD++   +++++      Q+   G +  D+ +  L + VN 
Sbjct: 120 RPWYKQAMNERGLILTKPYVDVAYNVLVVTMA-----QATSQGVVGGDLSIASLVESVNR 174

Query: 185 VNLFDAGYLFITTKDGVTIAHPNAENNGEKFSQF-------LPNVDLKEGT---QRIELD 234
           + L   GY  +  KDG  IA+ +A    +   Q        LP    + GT      E +
Sbjct: 175 MTLPANGYAIMMHKDGTVIAYKDASKAMKPVGQIDNDLNHDLPQQSRQAGTLLPMYFENE 234

Query: 235 GKYYLVKFAQVPSESWYIGAVVDESIAFAMVDDLRHSSLIYTVIGVLLSIIGLSFLIKVL 294
           G+  LV    +P+  W +  V+D+    A + DL  +    + + +LLS++ +S+L+ +L
Sbjct: 235 GRDKLVWGVDIPNTDWELVIVLDKETLEAPLTDLLLTQFGLSAVVLLLSVLAISWLVNLL 294

Query: 295 MKPLGALSRAIEDVASGQGDLTKRLDTNTDMEFAILAKDFNVFCETLQKRIQHLKGIGAE 354
           + PLG +S+A+  +A G GDLT+R++ +T  E  +LA  FN F  +  + I H++ + +E
Sbjct: 295 LGPLGRVSQALARIADGNGDLTQRIEVDTQDEVGVLADSFNRFVGSQHQLISHIRQLASE 354

Query: 355 IMHGTEQTVLGAHESASAMAQQLQELEQLATAMHEMAVTATEVANNAQGAAAAAHEADEA 414
           +    E+++   H + + + +Q QE+  +ATA+ EMA    E+A NA+  A AA ++  +
Sbjct: 355 LDADAERSLKTNHIAVAELQRQQQEVAMVATAVTEMASATNEIAANAENTATAAQQSAAS 414

Query: 415 SQDGSKVVSDTTRSIDALSARIEQAVEEVKGLEVATGNIETILKVINDIADQTNLLALNA 474
           S  G ++V+ T  SI++L+  + QA + ++ L     +I +IL  I  IA+QTNLLALNA
Sbjct: 415 SFQGKELVNKTRSSINSLADEVAQATDVIEDLSRHAQSISSILATIQGIAEQTNLLALNA 474

Query: 475 AIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNESKYTA 534
           AIEAARAGE GRGFAVVADEVR L++RTQ ST E+   IE LQ   +   + M  S+  A
Sbjct: 475 AIEAARAGEQGRGFAVVADEVRVLSRRTQDSTQEVHATIETLQRTTAKAVSLMESSQMLA 534

Query: 535 DDAVQKAQLANESLQRIRGAIQRISDMNMQIASAAEEQSLVAEEINTNTVKIKDLSTQVA 594
            ++V+ A  A ++L+ I  A+  ISDM  QIA+AAEEQ+ V  EI  NTV IKD++ ++ 
Sbjct: 535 GNSVEDANAAAKALEEITQAVNVISDMAGQIATAAEEQTQVTGEITQNTVAIKDVTDEIT 594

Query: 595 DSAKSASMAMEVQTENVREQGKLLNTFIV 623
           ++AKS     +       +    + TFI+
Sbjct: 595 EAAKSDLTQAQALKARANDLNAQVATFIL 623