Pairwise Alignments

Query, 339 a.a., outer membrane protein assembly factor BamC from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., outer membrane protein assembly factor BamC from Klebsiella michiganensis M5al

 Score =  167 bits (423), Expect = 4e-46
 Identities = 96/334 (28%), Positives = 159/334 (47%), Gaps = 5/334 (1%)

Query: 8   VLGSLAVLVLSACSSSPTQRRQAKDDFDYLETTEFKPWVLPQGAT-PQFYPNYDIPQGAF 66
           V G   VL+L+ACSS    +RQ   D  YL+ T       P G   P    +Y+IP    
Sbjct: 13  VAGVSLVLLLAACSSDSRYKRQVSGDEAYLQATPLSELHAPAGMILPVQVGDYNIPVATS 72

Query: 67  HGGVGNVVDIRPPQQVLELIPGARAERQNGEVTLWMLRQDEAQKVWDTALKMIAERKIPL 126
            G  G  +DIRPP Q L L+ GAR +  NG+    M+    +  +W     ++  +   +
Sbjct: 73  TGNTGKALDIRPPAQPLALVSGARTQF-NGDTATLMVENGRSGSLWAQVASIVQSKNYTI 131

Query: 127 RKQTDSM--VETDWVDWVSEDEDVTIGSRYLMSMVETNNRYGFKISLIGWRENGQVQTVS 184
            K+ D+   + TDWV+W   DED     RY +S+ +   +    + L+   + G+     
Sbjct: 132 AKRDDASQTLNTDWVEWNRLDEDQQYRGRYQISVKQQGYQQAVIVKLVNLEQAGK-PVAD 190

Query: 185 TTNKERYNAFMTNLVTTRYDSDVRAEAARRAQELVKQIPITMGSDRSGFPVIIARTPYDV 244
             + +RY+  M N+++   D +  +      +       +  G+D +G P++I R P+++
Sbjct: 191 PASLQRYSTAMLNVISEGLDLNATSAQNAAQKNAGATFDVQSGADDTGLPMLIVRAPFNL 250

Query: 245 LWQRLPELLPKMGFTIEERNQSQGTVKAKYAAPDDEFWQQVGVKPIELKSGTYTFLFGDL 304
           +WQRLP  L K+G  + + ++SQG +   Y    D  W  +G +  +L SG Y    GDL
Sbjct: 251 VWQRLPGALEKVGMKVTDSSRSQGNLSVTYKPLSDSGWTDLGARDPQLVSGDYKLQVGDL 310

Query: 305 GNRTSINVTDSAGKPVNEALLKEMVPVLSAVVDK 338
            NR+S+   D  G  + ++    +V V  A + K
Sbjct: 311 DNRSSLQFIDPKGHTLTQSQNDALVAVFQAALSK 344