Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., Acetylornithine deacetylase (EC 3.5.1.16) from Pseudomonas fluorescens FW300-N2E2

 Score = 81.6 bits (200), Expect = 3e-20
 Identities = 101/395 (25%), Positives = 176/395 (44%), Gaps = 41/395 (10%)

Query: 6   VLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTT----NFWARRGTQS- 60
           VLA+ + L++ ++V+ +++    +   R   L   IES++ +D +    N +A  G +  
Sbjct: 5   VLAIFERLLAFETVS-SESNLALIEYVRELLLSKGIESLIVKDESGKKANLFASTGPRDL 63

Query: 61  PLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEH 120
           P  + +GHTDVVPA   + W  P F+ TV DG ++GRG+ DMKG +A  I A    + + 
Sbjct: 64  PGVLLSGHTDVVPAAGQA-WTVPAFQATVRDGRVYGRGSCDMKGFIALAIDA----MLDA 118

Query: 121 PDH--QGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNG 178
            DH     +   ++ DEE   + G  R+++ L        +C++GEP++   V      G
Sbjct: 119 ADHSLNRPLQLALSHDEEIGCV-GVRRLLDVLHLAPVRPFLCVIGEPTNMQFV-----LG 172

Query: 179 RRGSITGDLKVKGTQGHVAYPHLANNPVHKALPALAELAATQWDEGNAYFPPTSFQIPNL 238
            +G  +     +G + H +    + N +H A   +A L  +Q            + +P  
Sbjct: 173 HKGKGSYRTYCRGLEAHSSLAPRSVNAIHVACDFIAALRQSQQQLQEQGAQDADYDVPYS 232

Query: 239 QAGTG------ASNVIPGEFDVQFNFR----FSTELTDEEIKRRVHSVL-DAHGL----D 283
               G      A N++P    + F  R       +L  E+++ R   ++ +A  L    D
Sbjct: 233 TVHVGQIVGGKALNIVPNLCTLDFEVRNLPDDDLDLFLEQLRERAEVIVREAKKLSSVAD 292

Query: 284 YDVKWTLSGQPFLTDTGELLAAVVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQVVELG 343
            +++ TL+  P L DT   + AV                + GT  G F  ++   VV  G
Sbjct: 293 IEIE-TLNVYPGL-DTHPSVEAVRFLKNFATPGTGTAKVSFGTEGGLFKQRLDVPVVVCG 350

Query: 344 PVN-ATIHKVNECVRIADLEKLTDMYQKTLNHLLG 377
           P +    HK +E + I+ +    D  ++ L  LLG
Sbjct: 351 PGSIEQAHKPDEFIEISQM----DAGERFLEGLLG 381