Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., succinyl-diaminopimelate desuccinylase, proteobacterial clade from Pseudomonas stutzeri RCH2

 Score =  480 bits (1236), Expect = e-140
 Identities = 240/374 (64%), Positives = 279/374 (74%), Gaps = 1/374 (0%)

Query: 4   SPVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARRGTQSPLF 63
           SP L LA ELI+R SVTP D GCQ LM +RL A GF IE M  ED  NFWA RG++ P+ 
Sbjct: 7   SPTLELACELINRPSVTPLDEGCQQLMTQRLAACGFAIEPMHIEDVENFWAIRGSEGPVL 66

Query: 64  VFAGHTDVVPAGPLSQWHTPPFEPTVID-GFLHGRGAADMKGSLACMIVAVERFIAEHPD 122
            FAGHTDVVP GPL  W  PPF   + + G LHGRGAADMKGSLA M+VAVERF A HPD
Sbjct: 67  CFAGHTDVVPTGPLQAWQNPPFSARIDEQGMLHGRGAADMKGSLAAMVVAVERFTAAHPD 126

Query: 123 HQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGS 182
           H+G I FLITSDEEGP  +GT  VVE L  R + +D CIVGEPSST  VGDVVKNGRRGS
Sbjct: 127 HKGQIAFLITSDEEGPAHHGTKAVVERLRERGQRLDWCIVGEPSSTTLVGDVVKNGRRGS 186

Query: 183 ITGDLKVKGTQGHVAYPHLANNPVHKALPALAELAATQWDEGNAYFPPTSFQIPNLQAGT 242
           + G L V+G QGHVAYPHLA NP+H A PALAELAA  WD+GNA+FPPTSFQI NL AGT
Sbjct: 187 LGGTLTVRGQQGHVAYPHLAKNPIHLAAPALAELAAEHWDDGNAFFPPTSFQISNLNAGT 246

Query: 243 GASNVIPGEFDVQFNFRFSTELTDEEIKRRVHSVLDAHGLDYDVKWTLSGQPFLTDTGEL 302
           G +NVIPG  +  FNFRFSTE T E++K+R  ++LD HGLD++V+W LSG PFLT+ G L
Sbjct: 247 GTTNVIPGTLEAVFNFRFSTESTVEQLKQRTAAILDKHGLDWNVEWALSGLPFLTEPGAL 306

Query: 303 LAAVVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQVVELGPVNATIHKVNECVRIADLE 362
           L  V  A+  V  +     T+GGTSDGRFIA +G QVVELGPVNATIH+V+E +  +DL+
Sbjct: 307 LDGVAKAIRSVTGRETTPSTSGGTSDGRFIATLGTQVVELGPVNATIHQVDEHILASDLD 366

Query: 363 KLTDMYQKTLNHLL 376
            LTD+Y  TL +LL
Sbjct: 367 LLTDIYYLTLVNLL 380