Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., succinyldiaminopimelate desuccinylase from Pseudomonas syringae pv. syringae B728a

 Score =  461 bits (1187), Expect = e-134
 Identities = 234/375 (62%), Positives = 277/375 (73%), Gaps = 2/375 (0%)

Query: 4   SPVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARRGT-QSPL 62
           SP L LA +LI R SVTP DA CQ +M++RL   GF++E M  ED  NFWA  GT   P+
Sbjct: 8   SPTLQLACDLIRRPSVTPVDADCQTVMMQRLGDAGFKLEPMRIEDVDNFWATHGTTDGPV 67

Query: 63  FVFAGHTDVVPAGPLSQWHTPPFEPTVID-GFLHGRGAADMKGSLACMIVAVERFIAEHP 121
             FAGHTDVVP GPL  W   PF+  + + G L GRGAADMKGSLA M+VA ERF+A+HP
Sbjct: 68  LCFAGHTDVVPTGPLQNWQNDPFDALIDEHGMLCGRGAADMKGSLAAMLVAAERFVADHP 127

Query: 122 DHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRG 181
           DH+GS+ FLITSDEEGP  +GT  VVE L ARNE +D CIVGEPSST  VGDVVKNGRRG
Sbjct: 128 DHKGSVAFLITSDEEGPAHHGTKAVVERLAARNERLDWCIVGEPSSTTLVGDVVKNGRRG 187

Query: 182 SITGDLKVKGTQGHVAYPHLANNPVHKALPALAELAATQWDEGNAYFPPTSFQIPNLQAG 241
           S+   L V+G QGHVAYPHLA NP+H A PALAELAA  WD GN +FPPTSFQI NL AG
Sbjct: 188 SLGATLTVRGKQGHVAYPHLAKNPIHLAAPALAELAAEHWDHGNDFFPPTSFQISNLNAG 247

Query: 242 TGASNVIPGEFDVQFNFRFSTELTDEEIKRRVHSVLDAHGLDYDVKWTLSGQPFLTDTGE 301
           TGA+NVIPG+    FNFRFSTE T E +++RV  +LD H LD+ V W LSG PFLT+ G 
Sbjct: 248 TGATNVIPGDLVAVFNFRFSTESTVEGLQQRVADILDRHELDWHVDWALSGLPFLTEPGA 307

Query: 302 LLAAVVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQVVELGPVNATIHKVNECVRIADL 361
           LL AV ++++ V  +     T+GGTSDGRFIA +G QVVELGPVNATIH+VNE +  +DL
Sbjct: 308 LLDAVSSSIKSVTGRETKASTSGGTSDGRFIATLGTQVVELGPVNATIHQVNERILASDL 367

Query: 362 EKLTDMYQKTLNHLL 376
           + LT++Y +TL  LL
Sbjct: 368 DVLTEIYYQTLVKLL 382