Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., succinyl-diaminopimelate desuccinylase from Sinorhizobium meliloti 1021

 Score =  286 bits (731), Expect = 9e-82
 Identities = 162/390 (41%), Positives = 219/390 (56%), Gaps = 19/390 (4%)

Query: 5   PVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFE-----DTTNFWARRGTQ 59
           PV  LA  LI   SVTPA+ G    +   L  +GF+++ +V +     D  N +AR G +
Sbjct: 6   PVSNLAA-LIRCPSVTPAEGGALAALEAMLAPVGFKVDRVVAKEPGTPDIENLYARTGGE 64

Query: 60  SPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAE 119
            P  +FAGHTDVVP G  + W  PPF   + +G ++GRGA DMKG +AC + AV R I +
Sbjct: 65  GPHLMFAGHTDVVPVGDEAAWSRPPFSAAIAEGEMYGRGAVDMKGGIACFVAAVARHIEK 124

Query: 120 HPDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGR 179
           H   +GSI FLIT DEEGP INGTV+++E   AR E  D C+VGEP++   +GD++K GR
Sbjct: 125 HGAPKGSISFLITGDEEGPAINGTVKLLEWAAARGERWDACLVGEPTNPDCIGDMIKIGR 184

Query: 180 RGSITGDLKVKGTQGHVAYPHLANNPVHKALPALAELAATQWDEGNAYFPPTSFQIPNLQ 239
           RGS++G + V G QGH AYPHLA+NPV   L     L    +D+G   F P++ ++  + 
Sbjct: 185 RGSLSGRITVHGVQGHAAYPHLADNPVRSILQIAQALMDPPFDDGTENFQPSNLEVTTID 244

Query: 240 AGTGASNVIPGEFDVQFNFRFSTELTDEEIKRRVHSVLDAHGLD-----------YDVKW 288
            G  A NVIP +    FN RF+   T E +   + + LD                Y++ W
Sbjct: 245 VGNTAVNVIPAKASAAFNIRFNDRWTAESLMAEIVARLDRAAAGSALRPGRAPARYEIVW 304

Query: 289 T-LSGQPFLTDTGELLAAVVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQVVELGPVNA 347
                  FLT    L+ ++  AVE V  + P L TTGGTSD RFI      VVE G V  
Sbjct: 305 NERPSHVFLTRNNALIDSLSGAVEAVTGRQPQLSTTGGTSDARFIKDY-CPVVEFGLVGK 363

Query: 348 TIHKVNECVRIADLEKLTDMYQKTLNHLLG 377
           T+H V+E V +ADLE LT +Y+  +    G
Sbjct: 364 TMHMVDERVALADLETLTGIYETFIARWFG 393