Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., succinyl-diaminopimelate desuccinylase (NCBI) from Rhodospirillum rubrum S1H

 Score =  290 bits (741), Expect = 6e-83
 Identities = 166/383 (43%), Positives = 224/383 (58%), Gaps = 20/383 (5%)

Query: 7   LALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVF-----EDTTNFWARRGTQSP 61
           LALA+ L++  SVTP DAG  D++   L ALGF    + F     E   N +ARRG   P
Sbjct: 17  LALARALVACPSVTPRDAGALDVLESALIALGFRCVRLPFGAEGGERVDNLYARRGGAGP 76

Query: 62  LFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIA--- 118
            F FAGHTDVVPAG    W  PPF   V+DG L GRGAADMKG +AC + AV R I+   
Sbjct: 77  CFGFAGHTDVVPAG--DGWSRPPFGAEVVDGALVGRGAADMKGGIACFVAAVARLISGPD 134

Query: 119 -----EHPDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGD 173
                   D  GSI  LIT DEEGP ++GT +V+E +    E +D+C+VGEP++   +GD
Sbjct: 135 STGSISRHDPTGSIALLITGDEEGPALHGTRKVLEWMEGAGERMDLCLVGEPTNPEGLGD 194

Query: 174 VVKNGRRGSITGDLKVKGTQGHVAYPHLANNPVHKALPALAELAATQWDEGNAYFPPTSF 233
           ++K GRRGS+T  + + G  GHVAYPHLA+NP+H+       L A   D+G A+F P+S 
Sbjct: 195 MIKIGRRGSLTATVTLLGRAGHVAYPHLADNPLHRLSTLTGLLLAETLDDGTAHFQPSSL 254

Query: 234 QIPNLQAGTGASNVIPGE----FDVQFNFRFSTELTDEEIKRRVHSVLDAHGLDYDVKWT 289
           Q+ ++  G  A+NVIP +    F+++FN R S E     I+ R  +  D     + +   
Sbjct: 255 QLTSIDVGNPAANVIPAKATLRFNIRFNDRHSGESLSAWIRARCLAACDGDESGFSLVLE 314

Query: 290 LSGQPFLTDTGELLAAVVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQVVELGPVNATI 349
            SG  FLT  G L   +  A + V  + P L T+GGTSD RFI +    V E G V  T+
Sbjct: 315 HSGDAFLTPPGPLSDLIATACQAVTGRRPELSTSGGTSDARFI-RSHCPVAEFGLVGRTM 373

Query: 350 HKVNECVRIADLEKLTDMYQKTL 372
           HK +E V +ADLE L+++Y++ L
Sbjct: 374 HKPDERVAVADLEALSEIYRRVL 396