Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., succinyl-diaminopimelate desuccinylase DapE from Phaeobacter inhibens DSM 17395

 Score =  223 bits (568), Expect = 7e-63
 Identities = 139/380 (36%), Positives = 202/380 (53%), Gaps = 10/380 (2%)

Query: 1   MTDSPV--LALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARRGT 58
           MT SP+    L  +LI   SVTP + G   L+ + L A GF    +   + +N  AR G 
Sbjct: 1   MTHSPLDPQQLTADLIRCASVTPEEGGALVLLDKVLSAAGFTCTRVDRGEVSNLIARWGD 60

Query: 59  QSP--LFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERF 116
           +       F GHTDVVP G  + W   PF     DGFL+GRGA DMK  +A  + A    
Sbjct: 61  KGHPRTMGFNGHTDVVPVGDTNAWTVDPFGAEEKDGFLYGRGATDMKSGVAAFVAAAIDL 120

Query: 117 IAEHPDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVK 176
           +   P   G+I   IT DEEG  I+GT  +++ +    E + +C+VGEP+    +G+++K
Sbjct: 121 VQTTPP-DGAILLTITGDEEGDAIDGTTALLDHMDREGEQMAVCLVGEPTCPDKMGEMIK 179

Query: 177 NGRRGSITGDLKVKGTQGHVAYPHLANNPVHKALPALAELAATQWDEGNAYFPPTSFQIP 236
            GRRGS++    V G QGH AYPH A NP++  +  +  LA+ + D+G  +F  ++  + 
Sbjct: 180 IGRRGSLSAWFTVTGVQGHSAYPHRAKNPLNAMVRLMDRLASHELDQGTEHFDASTLAVV 239

Query: 237 NLQAGTGASNVIPGEFDVQFNFRFSTELTDEE----IKRRVHSVLDAHGLDYDVKWTLSG 292
            +  G  A+NVIP +     N RF+   T  E    ++          G+D  V+  +SG
Sbjct: 240 TIDTGNPATNVIPAQTRSTVNIRFNDAHTGAELSDWLRAEAARAAKDFGVDIAVEIKVSG 299

Query: 293 QPFLTDTGELLAAVVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQVVELGPVNATIHKV 352
           + F+T  G L   V AAVE    + P L TTGGTSD RF+ +    VVE+G V  T+H+V
Sbjct: 300 ESFITPPGPLSDLVSAAVETETGRKPQLSTTGGTSDARFV-KNHCPVVEVGLVGKTMHQV 358

Query: 353 NECVRIADLEKLTDMYQKTL 372
           +E V IA + +L  +Y + L
Sbjct: 359 DERVEIAQIHQLKSIYGRIL 378