Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., succinyl-diaminopimelate desuccinylase (RefSeq) from Shewanella loihica PV-4

 Score =  530 bits (1364), Expect = e-155
 Identities = 254/371 (68%), Positives = 297/371 (80%)

Query: 6   VLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARRGTQSPLFVF 65
           VL LA++LI+R SVTP D GCQ LM +RL A GF IE MVFEDTTN WARRG Q PLF F
Sbjct: 5   VLTLAQDLIARASVTPLDEGCQPLMAKRLAAKGFNIEPMVFEDTTNMWARRGDQGPLFCF 64

Query: 66  AGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQG 125
           AGHTDVVP G L++WHTPPFEP VIDG+LHGRGAADMKGSLA M+VA ERF+ +HPDH+G
Sbjct: 65  AGHTDVVPVGDLNRWHTPPFEPVVIDGYLHGRGAADMKGSLAAMVVATERFVDKHPDHKG 124

Query: 126 SIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGSITG 185
           SI FLITSDEEGPFINGT RV++TL ARNE I   +VGEPSST  +GD+VKNGRRGS+TG
Sbjct: 125 SIAFLITSDEEGPFINGTTRVIDTLEARNEKITWSLVGEPSSTHKLGDIVKNGRRGSLTG 184

Query: 186 DLKVKGTQGHVAYPHLANNPVHKALPALAELAATQWDEGNAYFPPTSFQIPNLQAGTGAS 245
           +L VKG QGHVAYPHLA+NP+HKA PAL ELA  +WD GN +FPPTSFQI N+  GTGAS
Sbjct: 185 NLTVKGVQGHVAYPHLADNPIHKAAPALDELARMKWDNGNEFFPPTSFQIANINGGTGAS 244

Query: 246 NVIPGEFDVQFNFRFSTELTDEEIKRRVHSVLDAHGLDYDVKWTLSGQPFLTDTGELLAA 305
           NVIPG  +V FNFR+STE+T E + +RV ++LDAHGLDYD+ W  +G PFLTD G LL A
Sbjct: 245 NVIPGSLEVMFNFRYSTEVTAEILIQRVLNILDAHGLDYDISWIFNGLPFLTDAGPLLDA 304

Query: 306 VVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQVVELGPVNATIHKVNECVRIADLEKLT 365
              A+ E+        T+GGTSDGRFIA  GAQV+ELGPVNATIHKVNECV++ D+E+L 
Sbjct: 305 TREAIYEITGTETDPQTSGGTSDGRFIAPTGAQVIELGPVNATIHKVNECVKVEDIEQLA 364

Query: 366 DMYQKTLNHLL 376
            +Y++ L  LL
Sbjct: 365 KVYERILEKLL 375