Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., acetylornithine deacetylase (RefSeq) from Shewanella loihica PV-4

 Score = 78.6 bits (192), Expect = 3e-19
 Identities = 95/386 (24%), Positives = 165/386 (42%), Gaps = 40/386 (10%)

Query: 11  KELISRQSVTPADA-------GCQDLMIERLKALGFEIESMVFEDTT---NFWARRGTQS 60
           +ELI+  S++  +A       G   L+ + L  LGF+ +     DT    N  A+ G   
Sbjct: 13  RELIATPSISALEAELDMSNQGVVTLLSQWLTDLGFDCQMQAVPDTRGKHNLLAKIGQGR 72

Query: 61  PLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEH 120
              + AGHTD VP     +W   PF  T  D   +G G+ DMKG  A +I AV +   + 
Sbjct: 73  GGLLLAGHTDTVPFDE-GRWSQDPFTLTEKDNRWYGLGSCDMKGFFALVIEAVRQMPTQ- 130

Query: 121 PDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRR 180
            D    +  L ++DEE   +NG     ++     E     ++GEP+    V        +
Sbjct: 131 -DFVRPLYILASADEE-TTMNGAKAFAQSKAIAPE---YALIGEPTGLKPV-----YMHK 180

Query: 181 GSITGDLKVKGTQGHVAYPHLANNPV---HKALPALAEL---AATQWDEGNAYFPPTSFQ 234
           G +   +++ G  GH + P    N +   H+ +  L +L    A  + E     P  +  
Sbjct: 181 GHLAQGIRITGRSGHSSDPAKGLNAIEIMHQVIGQLLKLKQHLAEHYREEAFSVPYPTMN 240

Query: 235 IPNLQAGTGASNVIPGEFDVQFNFRFSTELTDEEIKRRVHSVLDAHGLDYDVKWTLS--- 291
             ++  G  A+N I G  D+  + R    L  E +++ +   L      Y    ++S   
Sbjct: 241 FGHIHGG-DAANRICGCCDLHLDIRPLPGLPLEVLEQLLTQYLAELSQRYPGSISISQLY 299

Query: 292 --GQPFLTDTGELLAAVVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQVVELGPVN-AT 348
              QPF    G+  A     V ++++QAP ++     ++  +I Q+G Q +  GP +   
Sbjct: 300 PGSQPF---AGQADAQWSQLVAQLSNQAPEVVNY--ATEAPYIQQLGCQTLVWGPGSIEQ 354

Query: 349 IHKVNECVRIADLEKLTDMYQKTLNH 374
            H+ +E +  A + K  D+ ++ + H
Sbjct: 355 AHQPDEYLDTAYINKTVDLLKQLIYH 380