Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., Probable succinyl-diaminopimelate desuccinylase DapE from Mycobacterium tuberculosis H37Rv

 Score = 73.6 bits (179), Expect = 8e-18
 Identities = 102/346 (29%), Positives = 147/346 (42%), Gaps = 36/346 (10%)

Query: 33  RLKALGFEIESMVFEDTTNFWARRGTQSPLFVFAGHTDVVP-AGPLSQWHTPPFEPTVID 91
           R +A GFEI   +          +  +S   + AGH D VP AG L             +
Sbjct: 37  RAQASGFEI---IRNGNAVLARTKLNRSSRVLLAGHLDTVPVAGNLPSRRE--------N 85

Query: 92  GFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGFLITSDEEGPFINGTVRVVETLM 151
             LHG GAADMK   A + + +   +AE P H  ++ F    +E     NG  R+   L 
Sbjct: 86  DQLHGCGAADMKSGDA-VFLHLAATLAE-PTHDLTLVFY-DCEEIDSAANGLGRIQRELP 142

Query: 152 ARNELIDMCIVGEPSSTLAVGDVVKNGRRGSITGDLKVKGTQGHVAYPHLANNPVHK--- 208
                 D+ I+GEP++       ++ G +G++   L V GT+ H A   L +N +HK   
Sbjct: 143 DWLSA-DVAILGEPTA-----GCIEAGCQGTLRVVLSVTGTRAHSARSWLGDNAIHKLGA 196

Query: 209 ALPALAELAATQWD-EGNAYFPPTSFQIPNLQAGTGASNVIPGEFDVQFNFRFSTELTDE 267
            L  LA   A   D +G  Y    S       AG  A NVIP    V  N+RF+ + +  
Sbjct: 197 VLDRLAVYRARSVDIDGCTYREGLSAV---RVAGGVAGNVIPDAASVTINYRFAPDRSVA 253

Query: 268 EIKRRVHSVLDAHGLDYDVKWTLSGQPFLTDTGELLAAVVAAVEEVNHQAPALLTTGGTS 327
              + VH V D  GLD  ++ T +    L    E   A  A VE    Q  A    G T 
Sbjct: 254 AALQHVHDVFD--GLDVQIEQTDAAAGALPGLSE--PAAKALVEAAGGQVRA--KYGWTD 307

Query: 328 DGRFIAQMGAQVVELGPVNATI-HKVNECVRIADLEKLTDMYQKTL 372
             RF A +G   V  GP +  + H  +E V + ++    D+ ++ L
Sbjct: 308 VSRF-AALGIPAVNYGPGDPNLAHCRDERVPVGNITAAVDLLRRYL 352