Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., succinyl-diaminopimelate desuccinylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  521 bits (1341), Expect = e-152
 Identities = 253/372 (68%), Positives = 293/372 (78%)

Query: 5   PVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARRGTQSPLFV 64
           PV  L K LI+R SVTP D GCQ LM ERL A+GF IE+MVFEDTTN WARRG   P+F 
Sbjct: 12  PVTELTKALIARPSVTPLDEGCQTLMAERLAAIGFNIEAMVFEDTTNMWARRGNTGPVFC 71

Query: 65  FAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQ 124
           FAGHTDVVP G LS+WHTPPFEPT+IDG+L+GRGAADMKGSLA M+VA ERF+A+HP+H 
Sbjct: 72  FAGHTDVVPTGDLSRWHTPPFEPTIIDGYLYGRGAADMKGSLAAMVVATERFVAKHPNHP 131

Query: 125 GSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGSIT 184
           GSI FLITSDEEGPFINGT RV++TL ARNE I   +VGEPSSTL +GDVVKNGRRGS+T
Sbjct: 132 GSIAFLITSDEEGPFINGTTRVIDTLEARNEKITWALVGEPSSTLKLGDVVKNGRRGSLT 191

Query: 185 GDLKVKGTQGHVAYPHLANNPVHKALPALAELAATQWDEGNAYFPPTSFQIPNLQAGTGA 244
            +L VKG QGHVAYPHLA+NP+HKA P LAEL+ T WD GNA+FPPTS QI N+  GTGA
Sbjct: 192 ANLTVKGVQGHVAYPHLADNPIHKAAPFLAELSQTHWDNGNAFFPPTSMQIANINGGTGA 251

Query: 245 SNVIPGEFDVQFNFRFSTELTDEEIKRRVHSVLDAHGLDYDVKWTLSGQPFLTDTGELLA 304
           SNVIPG  +V FNFR+STE+T E +  RV ++L AH LDYD++WT +G PFLT  G LL 
Sbjct: 252 SNVIPGALEVMFNFRYSTEVTAEILIERVETLLTAHELDYDIRWTFNGLPFLTGEGPLLD 311

Query: 305 AVVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQVVELGPVNATIHKVNECVRIADLEKL 364
           A   A+ +V        TTGGTSDGRFIA  GA+V+ELGPVNATIHKVNECV++ DLE+L
Sbjct: 312 ATRHAIRQVTGYDTDPQTTGGTSDGRFIAPTGAKVLELGPVNATIHKVNECVKVDDLEQL 371

Query: 365 TDMYQKTLNHLL 376
              Y+  L  LL
Sbjct: 372 ALCYEVILEQLL 383