Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 508 a.a., M20 family peptidase from Ralstonia sp. UNC404CL21Col

 Score = 70.1 bits (170), Expect = 1e-16
 Identities = 94/395 (23%), Positives = 150/395 (37%), Gaps = 93/395 (23%)

Query: 61  PLFVFAGHTDVVPAGPLSQ--WHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIA 118
           P+ + A H DVVP  P ++  W  PPF+  V DG + GRGA D KG+L   + A+E   A
Sbjct: 128 PIMLMA-HQDVVPIAPGTEGDWTQPPFDGVVKDGMVWGRGAWDDKGNLISQMEAIELLAA 186

Query: 119 EHPDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCI-------------VGEP 165
                + +I     +DEE     G  ++   L +R E +D  I             + +P
Sbjct: 187 SGFKPRRTIHLAFGADEEVGGDRGAKQIAALLKSRGERLDFVIDEGLLITEGVLPGLTKP 246

Query: 166 SSTLAVGDVVKNGRRGSITGDLKVKGTQGHVAYP----------------HLANNPVHKA 209
           ++ + V +      +G ++  LKV  T GH + P                 L ++ +   
Sbjct: 247 AALIGVAE------KGFLSVQLKVGATPGHSSMPPPHGQSAIAMMSATLKRLDDDQLPAG 300

Query: 210 LPALA-ELAATQWDEGNAY----------FPP-----------------TSFQIPNLQAG 241
           +  +A E+ AT   E   +          F P                 T+  +  +QAG
Sbjct: 301 IRGVAQEMFATLAPEMQGFSRVALSNLWLFGPLVQKQLEASGSSNAMLRTTTALTIVQAG 360

Query: 242 TGASNVIPGEFDVQFNFRFSTELTDEEIKRRVHSVLDA---HGLDYDVKWTLSGQPFLTD 298
               NV+PG  +   NFR     T   +   V     A   HG     K+ LS  P  ++
Sbjct: 361 -NKDNVLPGRAEATVNFRLLPGDTIASVTAHVEDAAKAAAPHG-----KFELSRLPGSSE 414

Query: 299 TGELLAAVVAAVEEVNHQ----------APALLTTGGTSDGRFIAQMGAQVVELGPVNA- 347
              +     A+ + +N            AP L+   G +D R + ++   V    PV A 
Sbjct: 415 ASPVSPTQSASYQLINKTVRELFPGTVVAPGLMI--GATDSRHMIEIADHVYRFSPVRAK 472

Query: 348 -----TIHKVNECVRIADLEKLTDMYQKTLNHLLG 377
                  H  NE +  A+L +L   Y + +    G
Sbjct: 473 PEDLPRFHGTNERITEANLVELIRFYHRLVQQAAG 507