Pairwise Alignments

Query, 377 a.a., succinyl-diaminopimelate desuccinylase from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., succinyl-diaminopimelate desuccinylase (RefSeq) from Shewanella sp. ANA-3

 Score =  522 bits (1344), Expect = e-153
 Identities = 255/372 (68%), Positives = 293/372 (78%)

Query: 5   PVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARRGTQSPLFV 64
           PV  L KELI+R SVTP D GCQ LM ERL A+GF IE MVFEDTTN WARRG + P+F 
Sbjct: 9   PVTELTKELIARPSVTPLDEGCQTLMAERLAAIGFNIEPMVFEDTTNMWARRGNEGPVFC 68

Query: 65  FAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQ 124
           FAGHTDVVPAG LS+WHTPPFEPT+IDG+L+GRGAADMKGSLA MIVA ERF+A+HP+H 
Sbjct: 69  FAGHTDVVPAGDLSRWHTPPFEPTIIDGYLYGRGAADMKGSLAAMIVATERFVAKHPNHP 128

Query: 125 GSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGSIT 184
           GSI FLITSDEEGPFINGT RV++TL ARNE I   +VGEPSSTL +GDVVKNGRRGS+T
Sbjct: 129 GSIAFLITSDEEGPFINGTTRVIDTLEARNEKITWTLVGEPSSTLKLGDVVKNGRRGSLT 188

Query: 185 GDLKVKGTQGHVAYPHLANNPVHKALPALAELAATQWDEGNAYFPPTSFQIPNLQAGTGA 244
            +L VKG QGHVAYPHLA+NP+HKA P LAEL+ T WD GN +FPPTS QI N+  GTGA
Sbjct: 189 ANLTVKGIQGHVAYPHLADNPIHKAAPFLAELSQTHWDNGNEFFPPTSMQIANINGGTGA 248

Query: 245 SNVIPGEFDVQFNFRFSTELTDEEIKRRVHSVLDAHGLDYDVKWTLSGQPFLTDTGELLA 304
           SNVIPG  +V FNFR+STE+T E +  RV ++L AH LDYD+ WT +G PFLT  G LL 
Sbjct: 249 SNVIPGTLEVMFNFRYSTEVTAEILIERVEALLTAHELDYDISWTFNGLPFLTGEGPLLD 308

Query: 305 AVVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQVVELGPVNATIHKVNECVRIADLEKL 364
           A   A+ ++        TTGGTSDGRFIA  GA+V+ELGPVNATIHKVNECV+I DLE+L
Sbjct: 309 ATRHAIRQITGYDTDPQTTGGTSDGRFIAPTGAKVLELGPVNATIHKVNECVKIDDLEQL 368

Query: 365 TDMYQKTLNHLL 376
              Y+  L  LL
Sbjct: 369 ALCYEVILEQLL 380