Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., flagellin D protein from Sinorhizobium meliloti 1021

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 87/404 (21%), Positives = 169/404 (41%), Gaps = 36/404 (8%)

Query: 4   TVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLGI 63
           ++ TNV+A+ A + L      + ++  R+SSG R+ +A D+AA   I+  + +    L  
Sbjct: 3   SILTNVAAMAALQTLRGIDSNMEETQARVSSGLRVGTASDNAAYWSIATTMRSDNMALSA 62

Query: 64  AVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDEL 123
                  G + + TA   M+   ++++ +R    +    +    ++  +QEE+  L  +L
Sbjct: 63  VQDALGLGAAKVDTAYAGMENAVEVVKEIR---AKLVAATEDGVDKAKIQEEIEQLKQQL 119

Query: 124 NRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYV-----A 178
             IA   SF+G   L         +    S       + ++++    + G S +      
Sbjct: 120 TSIATAASFSGENWLQADITTPVTKSVVGSFVRDSSGVVSVKTIDYVLDGNSVLFDTVGD 179

Query: 179 AALADKQWQVTKGKQQLNISY--------VNAQGENENIQIQAKEGDDIEELATY----- 225
           A + DK + V++    L ++         V A   +E I   A    D   +  Y     
Sbjct: 180 AGILDKIYNVSQASVTLPVNVNGTTTEYTVAAYAVDELIAAGATFDGDSANVTGYTVPAG 239

Query: 226 ---INGKTDKVSAS------VNEKGQLQLYIAGKETSGTLSFSGSLANELQMNLLGYEAV 276
               NG   KV  +      V   GQ  +Y  G    G      ++A    +N++   ++
Sbjct: 240 GIDYNGNFVKVEGTWVRAIDVAATGQEVVYDDGTTKWGV---DTTVAGAPAINVVAPASI 296

Query: 277 DNLDISSAGGAQRAVSVI---DTALKYVDGHRSELGAMQNRFQHAISNLDNVHENLAASN 333
           +N+DI++A  A    ++I   D AL+ +    S LG++  R       +  + +++ +  
Sbjct: 297 ENIDITNAAQAANLDALIRGVDEALEDLISATSALGSISMRIGMQEEFVSKLTDSIDSGI 356

Query: 334 SRIKDADYAKETTQMIKQQILQQVSTSVLAQAKRQPKFVLFLLR 377
            R+ DAD  +E+T++   Q  QQ++   L+ A    + +L L R
Sbjct: 357 GRLVDADMNEESTRLKALQTQQQLAIQSLSIANTNSENILQLFR 400