Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., flagellin-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  179 bits (453), Expect = 1e-49
 Identities = 95/181 (52%), Positives = 128/181 (70%), Gaps = 1/181 (0%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           MA+TVNTNV+++ AQ++LN +S  L  S+ERLSSG RINSAKDDAAGL ISNRL +Q+RG
Sbjct: 1   MAITVNTNVTSMKAQKNLNMSSGQLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           L + +RNANDGISI Q AEGAMQE T +LQRMRDLS+Q+ NG+NSA +  A+Q+E+  L 
Sbjct: 61  LEVGMRNANDGISIAQIAEGAMQEQTNMLQRMRDLSIQAENGANSADDLQAIQDEITQLI 120

Query: 121 DELNRIAETTSFAGRKLLNGQFMKA-SFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAA 179
            E+  I  +T+F   KL+ G F     FQ+G   GE V +++    + SL +   + + +
Sbjct: 121 TEITAIGNSTAFGNTKLMTGDFSAGKKFQVGHQEGEDVTITVNTNNATSLSVNAVTVLTS 180

Query: 180 A 180
           A
Sbjct: 181 A 181



 Score = 94.7 bits (234), Expect = 3e-24
 Identities = 74/253 (29%), Positives = 124/253 (49%), Gaps = 11/253 (4%)

Query: 133 AGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDS---LEMG------GFSYVAAALAD 183
           +G+   + + + +  +I ++  +A  L++ N  +     LE+G      G S    A   
Sbjct: 22  SGQLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEVGMRNANDGISIAQIAEGA 81

Query: 184 KQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGKTDKVSASVNEKGQL 243
            Q Q    ++  ++S     G N    +QA + D+I +L T I    +  +A  N K   
Sbjct: 82  MQEQTNMLQRMRDLSIQAENGANSADDLQAIQ-DEITQLITEITAIGNS-TAFGNTKLMT 139

Query: 244 QLYIAGKETSGTLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRAVSVIDTALKYVDG 303
             + AGK+          +   +  N     +V+ + + ++ G   ++  ID A+K +D 
Sbjct: 140 GDFSAGKKFQVGHQEGEDVTITVNTNNATSLSVNAVTVLTSAGRNSSLLKIDNAIKKIDT 199

Query: 304 HRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSVLA 363
            R+ LGA+QNR  H ISN  N   N+A + SRI D D+AKET+ M K Q+LQQ  +++LA
Sbjct: 200 QRAALGAVQNRLAHNISNSANTQANVADAKSRIVDVDFAKETSAMTKNQVLQQTGSAMLA 259

Query: 364 QAKRQPKFVLFLL 376
           QA + P+  L LL
Sbjct: 260 QANQLPQVALSLL 272