Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., flagellin-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  169 bits (427), Expect = 1e-46
 Identities = 91/173 (52%), Positives = 123/173 (71%), Gaps = 1/173 (0%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           MA+TVNTNV+++ AQ++L  ++  L  S+ERLSSG RINSAKDDAAGL ISNRL +Q+RG
Sbjct: 1   MAITVNTNVTSMKAQKNLTLSNRDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           L + +RNAND ISI Q AEGAMQE T +LQRMRDLS+Q+ NG+NSA +  +L+ EM  L 
Sbjct: 61  LEVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLSIQAENGANSADDLTSLKNEMDQLA 120

Query: 121 DELNRIAETTSFAGRKLLNGQFMKA-SFQIGASSGEAVQLSLRNMRSDSLEMG 172
            E+  I  TT+F   KL+ G F     FQ+G  + E V ++++   + +L +G
Sbjct: 121 LEITAIGNTTAFGDTKLMTGGFSNGKKFQVGHQNAEDVTVTVKTNNAGTLSVG 173



 Score =  101 bits (251), Expect = 3e-26
 Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 13/244 (5%)

Query: 143 MKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAALADKQWQVTKGKQQLNISYVNA 202
           + +  +I ++  +A  L++ N  +  +         A  A    Q+ +G  Q      N 
Sbjct: 32  LSSGLRINSAKDDAAGLAISNRLNSQVRGLEVGMRNANDAISIAQIAEGAMQ---EQTNM 88

Query: 203 QGENENIQIQAKEGDDIEELATYINGKTDKVSASVNEKGQLQLYIAGKETSGTLSF---- 258
                ++ IQA+ G +  +  T +  + D+++  +   G    +   K  +G  S     
Sbjct: 89  LQRMRDLSIQAENGANSADDLTSLKNEMDQLALEITAIGNTTAFGDTKLMTGGFSNGKKF 148

Query: 259 ------SGSLANELQMNLLGYEAVDNLDISSAGGAQRAVSVIDTALKYVDGHRSELGAMQ 312
                 +  +   ++ N  G  +V  LD++++GG   A+  ID A+K +D  R+ LGA+Q
Sbjct: 149 QVGHQNAEDVTVTVKTNNAGTLSVGALDVTTSGGRSTAMLKIDAAIKSIDTQRASLGAIQ 208

Query: 313 NRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSVLAQAKRQPKFV 372
           NR  H ISN  N   N+A + SRI D D+AKET+ M K Q+LQQ  +++LAQA + P+  
Sbjct: 209 NRLAHNISNSANTQANVADAKSRIVDVDFAKETSTMTKNQVLQQTGSAMLAQANQLPQIA 268

Query: 373 LFLL 376
           L LL
Sbjct: 269 LSLL 272