Pairwise Alignments
Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056
Subject, 274 a.a., flagellin from Rhodopseudomonas palustris CGA009
Score = 109 bits (273), Expect = 8e-29
Identities = 58/168 (34%), Positives = 103/168 (61%), Gaps = 3/168 (1%)
Query: 5 VNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLGIA 64
++TN +A A R+LN S SL +L+SG+RI SA DDAAGL IS R+ + + L A
Sbjct: 4 ISTNTAANSAVRYLNINSAQETSSLSKLASGSRITSASDDAAGLAISTRISSDVTTLQQA 63
Query: 65 VRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDELN 124
NA+ ++I+QTA+G + +L RM+ L+ +SA+G+ + + R + E + L+ +++
Sbjct: 64 ATNASQAVAILQTADGGASNISDILARMKSLASESASGTTTDSSRAYINSEFSQLSSQID 123
Query: 125 RIAETTSFAGRKLLNGQFMKAS---FQIGASSGEAVQLSLRNMRSDSL 169
IA T ++ + LL+G + AS +G S +++ ++L N+++ +L
Sbjct: 124 SIASGTRYSSQSLLDGTSVFASGVAVLVGTQSSDSITITLSNLKASTL 171
Score = 80.9 bits (198), Expect = 4e-20
Identities = 69/269 (25%), Positives = 125/269 (46%), Gaps = 29/269 (10%)
Query: 123 LNRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAALA 182
+N ET+S + KL +G +I ++S +A L++ S + + A+ A
Sbjct: 19 INSAQETSSLS--KLASGS------RITSASDDAAGLAISTRISSDVTTLQQAATNASQA 70
Query: 183 DKQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGKTDKVSASVNEKGQ 242
Q G NIS + A+ +++ ++ G + YIN + ++S+ ++
Sbjct: 71 VAILQTADGGAS-NISDILAR--MKSLASESASGTTTDSSRAYINSEFSQLSSQIDSIAS 127
Query: 243 LQLYIAGKETSGTLSFSGSLA---------------NELQMNLLGYEAVDNLDISSAGGA 287
Y + GT F+ +A + L+ + LG V LD+SS GA
Sbjct: 128 GTRYSSQSLLDGTSVFASGVAVLVGTQSSDSITITLSNLKASTLG---VSTLDVSSLSGA 184
Query: 288 QRAVSVIDTALKYVDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQ 347
A+S +DTA+ V R+ +GA ++RF + ++ +NL ++NS IKD D A E +
Sbjct: 185 TTALSALDTAINTVSSARASIGAQESRFNFSADSISTQTQNLQSANSAIKDVDIAAEQAK 244
Query: 348 MIKQQILQQVSTSVLAQAKRQPKFVLFLL 376
+ ++ Q + S A A + P+++L LL
Sbjct: 245 LSSAEVKTQAAVSAEAAANQMPQYLLKLL 273