Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., flagellin domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  129 bits (324), Expect = 1e-34
 Identities = 107/377 (28%), Positives = 171/377 (45%), Gaps = 84/377 (22%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           M++ +N N+ A+ A R+L+S+   L+ S+ RLSSG R+ +A DDAAGL I   + + +  
Sbjct: 1   MSLVINHNLMAMNAARNLSSSYGNLSTSVRRLSSGLRVGAASDDAAGLAIRELMRSDIAA 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           L   VRNAND IS++QTA+GA+    + L RM++L+ Q+A G+ ++ +R+ +  E  A+ 
Sbjct: 61  LNQGVRNANDAISLIQTADGALGVIDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMA 120

Query: 121 DELNRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLR-NMRSDSLEMGGFSYVAA 179
            E+ RIA +T F G  LLNG    A+   G+      +L +     +D  E   + Y+  
Sbjct: 121 SEITRIANSTDFNGIHLLNGNLSGATHD-GSGLVSTGKLKVHFGSANDCSE--DYYYIRI 177

Query: 180 ALADKQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGKTDKVSASVNE 239
                    T     L +    A+G+ ++I  Q+     +E +   I  K DK+ A++  
Sbjct: 178 G--------TSTASALGVGSQAAEGKGKSISTQSAAQAALEGIENAIISK-DKIRANL-- 226

Query: 240 KGQLQLYIAGKETSGTLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRAVSVIDTALK 299
                               G+L N L+        + NL I S                
Sbjct: 227 --------------------GALQNRLE------NTISNLQIQS---------------- 244

Query: 300 YVDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVST 359
                                      ENL A+ SRI D D + E T+  +QQIL Q + 
Sbjct: 245 ---------------------------ENLQAAESRISDVDVSSEMTEFTRQQILTQAAV 277

Query: 360 SVLAQAKRQPKFVLFLL 376
           ++L+QA   P+  + LL
Sbjct: 278 AMLSQANSLPRMAMQLL 294