Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., flagellin domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  111 bits (277), Expect = 3e-29
 Identities = 80/247 (32%), Positives = 124/247 (50%), Gaps = 33/247 (13%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           M++ +N N+ AL A R+LN +   L  S  RLSSG R+ +A DDAAGL I   +   +  
Sbjct: 1   MSLVINHNMMALNASRNLNESYGRLATSTRRLSSGLRVGTAADDAAGLAIRELMRADIST 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           +   VRNAND IS++QTA+GA+Q   + L RM++L+ Q+A G+ ++ +R+ ++ E  A+ 
Sbjct: 61  MRQGVRNANDAISMIQTADGALQIIDEKLIRMKELAEQAATGTYNSDQRLMIESEYQAMA 120

Query: 121 DELNRIAETTSFAGRKLLNGQF--------------MKASFQIGASSGE----------- 155
            E+ RIA  T F G  LL+G                +K  F  G  S E           
Sbjct: 121 SEITRIANATDFNGIHLLDGTLSGTHDGSGLRQTGELKIHFGTGNDSNEDYYYIKIGGAT 180

Query: 156 AVQLSLRNMRSDSLEMGGFSYVAAALADK------QWQVTKGKQQLNISYVNAQGEN--E 207
           A QL + N  +     GG++    + A        Q  ++K K +  +  +  + EN   
Sbjct: 181 ASQLGIGNASASGAAAGGYTISTQSAAQNALTALDQAIISKDKIRAALGALQNRLENTIS 240

Query: 208 NIQIQAK 214
           N+ IQA+
Sbjct: 241 NLTIQAE 247



 Score = 77.4 bits (189), Expect = 5e-19
 Identities = 47/148 (31%), Positives = 80/148 (54%), Gaps = 6/148 (4%)

Query: 235 ASVNEKGQLQLYIAGKETSGT----LSFSGSLANELQMNLLGYE--AVDNLDISSAGGAQ 288
           + + + G+L+++      S      +   G+ A++L +        A     IS+   AQ
Sbjct: 149 SGLRQTGELKIHFGTGNDSNEDYYYIKIGGATASQLGIGNASASGAAAGGYTISTQSAAQ 208

Query: 289 RAVSVIDTALKYVDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQM 348
            A++ +D A+   D  R+ LGA+QNR ++ ISNL    ENL +S SRI D D A+E T+ 
Sbjct: 209 NALTALDQAIISKDKIRAALGALQNRLENTISNLTIQAENLQSSESRISDVDVAEEMTEF 268

Query: 349 IKQQILQQVSTSVLAQAKRQPKFVLFLL 376
           ++ QIL Q + ++L+QA   P+  + L+
Sbjct: 269 VRNQILTQSAVAMLSQANSLPQMAMKLI 296