Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 608 a.a., protein containing flagellin N-terminal / flagellin C-terminal from Marinobacter adhaerens HP15

 Score =  175 bits (443), Expect = 3e-48
 Identities = 132/360 (36%), Positives = 191/360 (53%), Gaps = 32/360 (8%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           M   +NTN+++L AQR+LN++    N +LERLSSG RINSAKDDAAGL IS R ++Q+ G
Sbjct: 1   MPQVINTNIASLNAQRNLNASQGQANVALERLSSGLRINSAKDDAAGLAISERFQSQIAG 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           L  A RNANDGIS+ QTAEGAM E T  LQR+R+L++QSAN +NS ++R AL +E+    
Sbjct: 61  LNQAQRNANDGISLAQTAEGAMDEITNNLQRIRELAVQSANATNSPSDRQALNQEVQQRI 120

Query: 121 DELNRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAA 180
           +E+NRIA  TSF G K+L+G F   +FQ+GA++GE + +S   + S   ++G      A 
Sbjct: 121 EEINRIAAQTSFNGLKVLDGTFDTQTFQVGANTGETIAIS--GLDSRGSQIGSVLKETAG 178

Query: 181 LA-DKQWQVTKGKQQLNISYVNAQGE--------NENIQIQAKEGDDIEELATYI----- 226
           L+ D           LN+S ++   +         E++ I A    D + LAT +     
Sbjct: 179 LSTDVIGPGEAATTDLNVSTLDFTTDLTITGTIGGEDVSIAAASYADADALATALQTEIQ 238

Query: 227 NGKTDKVSASVNEKGQLQLYIAGKE------TSGTLSFSGSLANELQMNLLGYEAVDNLD 280
           NG  D    +V   G   L I          TS ++S +  +A     N  G       +
Sbjct: 239 NGGGDLAEVTVTVDGN-TLTITNPTSTDFPVTSFSISDASGVAGTTADNTGG-----GTN 292

Query: 281 ISSAGGAQRAVSVIDTALKYVDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDAD 340
           I+ AGG     ++  + L + +G     G +      A S+ D+V   L A     +D D
Sbjct: 293 IAGAGGTD---TIDVSGLDFTNGGTITFGGVDYPIT-AGSDFDDVAAELQAQLQANEDPD 348



 Score =  104 bits (259), Expect = 8e-27
 Identities = 54/103 (52%), Positives = 75/103 (72%)

Query: 275 AVDNLDISSAGGAQRAVSVIDTALKYVDGHRSELGAMQNRFQHAISNLDNVHENLAASNS 334
           AV  +DISS  GA  A+  ID A+  ++G+R+ELGA+QNRF+  I+NL    ENL+ASNS
Sbjct: 505 AVTGVDISSRDGADLAMISIDYAIDTINGYRAELGAVQNRFESTIANLATTSENLSASNS 564

Query: 335 RIKDADYAKETTQMIKQQILQQVSTSVLAQAKRQPKFVLFLLR 377
           RI+DAD+A E+ ++ + Q+LQQ   SVLAQA  +P+ VL LL+
Sbjct: 565 RIRDADFAAESAELARTQVLQQAGLSVLAQANARPQQVLQLLQ 607