Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 614 a.a., flagellin FliC from Marinobacter adhaerens HP15

 Score =  186 bits (472), Expect = 2e-51
 Identities = 118/306 (38%), Positives = 173/306 (56%), Gaps = 26/306 (8%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           MA+ +NTNV++L AQ  L  +  + NQ+LERLSSG RINSAKDDAAGL IS R ++Q+ G
Sbjct: 1   MALGINTNVASLSAQNQLGQSQNLSNQALERLSSGLRINSAKDDAAGLAISTRFQSQISG 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           L +A RNANDGIS+ QTAEGA+ E T  LQR+R+L++QSAN +NS ++R AL +E+    
Sbjct: 61  LNVATRNANDGISLAQTAEGALDEITNNLQRIRELAVQSANATNSDSDREALNQEVDQRI 120

Query: 121 DELNRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAA 180
            E+NRIA  TSF G K+L+G F   +FQ+GA++GE + ++  + R   L     S  +  
Sbjct: 121 AEVNRIASQTSFNGLKVLDGTFGTQAFQVGANAGETISVAGLDSRGSQLG-ATISQTSGL 179

Query: 181 LADKQWQVTKGKQQLNISYVNAQGE--------NENIQIQAKEGDDIEELATYINGKTDK 232
            A        G+  L++S ++  G+         E I + A    D + LA  I G+ D 
Sbjct: 180 AATSLGAGDAGETSLDVSGLDFSGDITVSSTIGGETIDVAAATYADADALAQAIQGEID- 238

Query: 233 VSASVNEKGQL-QLYIAGKETSGTLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRAV 291
                   G L  + +A  +   ++ FS +   ++            +DIS A G Q +V
Sbjct: 239 ------SNGNLADVTVAASDDGNSIVFSNASTTDI---------AATIDISDASGTQVSV 283

Query: 292 SVIDTA 297
           +  D +
Sbjct: 284 TGADVS 289



 Score =  112 bits (279), Expect = 4e-29
 Identities = 116/412 (28%), Positives = 188/412 (45%), Gaps = 54/412 (13%)

Query: 2   AMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRI----NSAKDDAAGLQISNRLETQ 57
           A   + +  A   Q  ++S   + + ++     GN I     S  D AA + IS+   TQ
Sbjct: 221 ATYADADALAQAIQGEIDSNGNLADVTVAASDDGNSIVFSNASTTDIAATIDISDASGTQ 280

Query: 58  MRGLGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSA-----NGSNSAAERVAL 112
           +   G  V           T +G+   T   L     L L S      + ++ ++    +
Sbjct: 281 VSVTGADV----------STTDGSTTATQVTLFDPSTLDLDSGVTGSFDVTDDSSNTTTV 330

Query: 113 QEEMAALNDELNRIAETTSFAGRKLLNGQFMKASFQIGA---------SSGEAVQLSLRN 163
              +AA     N +A+ TS     L    F  A   +GA          S  AV   + N
Sbjct: 331 SFSLAAGTG--NTLADLTSAVQAGLTAAGFT-AGTDLGAVDDGSVVQIESDSAVTYDIAN 387

Query: 164 MRSD-----SLEMGGFSYVAAALADKQWQVTKGKQQLNISY-VNAQGENENIQIQAKEGD 217
           + +      +   GG S      A++Q   ++ +     S+ +N  GE     I+  +  
Sbjct: 388 ITASDGGTPNASTGG-SVSTLTAAEEQTVASRFEAGETTSFSLNVAGE----AIEVTDAS 442

Query: 218 DIEELATYINGKTDK--VSASVNEKGQLQLYIAGKETSGTLSFS----GSLANELQMNLL 271
           +++++   ING T    VSA ++  G   ++ + K  + T S +    G   NE+ + + 
Sbjct: 443 NLQDVVAQINGATKDTGVSAFLSSSGDDIVFASAKGENFTASITTDVDGDGTNEVDLTVD 502

Query: 272 GYE------AVDNLDISSAGGAQRAVSVIDTALKYVDGHRSELGAMQNRFQHAISNLDNV 325
                    +V+ LDIS+  G+ +A+  +D A+  V+  RS+LGA+QNRF+  I+NL   
Sbjct: 503 SSTDPNSNVSVNGLDISTRAGSDQALVAVDFAIDQVNQFRSDLGAVQNRFESTIANLSTS 562

Query: 326 HENLAASNSRIKDADYAKETTQMIKQQILQQVSTSVLAQAKRQPKFVLFLLR 377
            ENL+ASNSRI DAD+A ET ++ K Q+LQQ   SVLAQA  +P+ VL LL+
Sbjct: 563 VENLSASNSRILDADFAAETAKLSKAQVLQQAGISVLAQANARPQQVLSLLQ 614