Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 573 a.a., flagellin FliC from Pantoea sp. MT58

 Score =  152 bits (385), Expect = 2e-41
 Identities = 108/355 (30%), Positives = 180/355 (50%), Gaps = 26/355 (7%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           MA  +NTN  +L+ Q ++N     L+ S+ERLSSG RINSAKDDAAG  I+NR ++ ++G
Sbjct: 1   MAQVINTNSLSLITQNNINKNQSALSSSMERLSSGLRINSAKDDAAGQAIANRFQSNIKG 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           L  A RNANDGIS  QT EGA+ E    LQR+R+L++QS NG+NS +++ ++Q+E+ +  
Sbjct: 61  LTQAARNANDGISAAQTTEGALSEINNNLQRVRELTVQSQNGTNSQSDQDSIQDEIKSRL 120

Query: 121 DELNRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGF------ 174
           DE++R++  T+F G  +L  +      Q+GA+ GE + + L+ + S +L + GF      
Sbjct: 121 DEIDRVSGQTTFNGVNVL-AKDGTMKIQVGANDGETISIDLKQIDSKTLGLTGFNVNGSG 179

Query: 175 ----------SYVAAALADKQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELAT 224
                     + VAA +  +      G     +S       + ++     +G ++   AT
Sbjct: 180 SVANTAATKANLVAAQIGAQPTPDANGVSTYTVSAGLKASSSADVLASLADGTNVR--AT 237

Query: 225 YINGKTDKVSASVNEKGQLQLYIAGKETSGTLSFSGSLANELQMNLLGYEAVD--NLDIS 282
             NG     + +   +     +  G   + T + SG+       + L  +A D  NL++S
Sbjct: 238 INNGFGTPTATNYTYQKATGDFTFGASIAATTAASGNSNAAQVQSFLTPKAGDTANLNVS 297

Query: 283 SAGGAQRAVSVIDTALKYVDGHRSELGAMQNRFQHAI-----SNLDNVHENLAAS 332
             G +   V   D  +   DG    + +  N  Q++      + LD + +N A +
Sbjct: 298 IGGTSVDVVLSSDGKIAAKDGSAMFIDSTGNLTQNSAGTVKPATLDALTKNFATA 352



 Score = 84.7 bits (208), Expect = 6e-21
 Identities = 43/87 (49%), Positives = 59/87 (67%)

Query: 291 VSVIDTALKYVDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIK 350
           +  +D A+  +D  RS LGA+QNR   A++NL+N   NL A+ SRI+DADYA E + M K
Sbjct: 486 LKALDAAISSIDKFRSSLGAIQNRLNSAVTNLNNTTTNLTAAQSRIQDADYATEVSNMSK 545

Query: 351 QQILQQVSTSVLAQAKRQPKFVLFLLR 377
            QI+QQ   SVLA+A + P+ VL LL+
Sbjct: 546 AQIVQQAGNSVLAKANQVPQQVLSLLQ 572