Pairwise Alignments
Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056
Subject, 272 a.a., flagellin (NCBI ptt file) from Shewanella oneidensis MR-1
Score = 183 bits (464), Expect = 6e-51
Identities = 98/181 (54%), Positives = 133/181 (73%), Gaps = 1/181 (0%)
Query: 1 MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
MA+TVNTNV++L AQ++LN+++ L S+ERLSSG RINSAKDDAAGL ISNRL +Q+RG
Sbjct: 1 MAITVNTNVTSLKAQKNLNTSASDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60
Query: 61 LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
L + +RNAND ISI Q AEGAMQE T +LQRMRDL++QS NG+NS+A+ AL+ EM L
Sbjct: 61 LEVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQSENGANSSADLSALKAEMDQLA 120
Query: 121 DELNRIAETTSFAGRKLLNGQFMKA-SFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAA 179
+E++ I +TT+F KLL G F +FQ+GA GE ++++++ SL +G +
Sbjct: 121 NEIDEIGKTTAFGTTKLLAGGFSAGKNFQVGAQDGEDIKVTVKASNKSSLSVGSLGNTTS 180
Query: 180 A 180
A
Sbjct: 181 A 181
Score = 93.6 bits (231), Expect = 6e-24
Identities = 70/244 (28%), Positives = 121/244 (49%), Gaps = 13/244 (5%)
Query: 143 MKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAALADKQWQVTKGKQQLNISYVNA 202
+ + +I ++ +A L++ N + + A A Q+ +G Q N
Sbjct: 32 LSSGLRINSAKDDAAGLAISNRLNSQVRGLEVGMRNANDAISIAQIAEGAMQ---EQTNM 88
Query: 203 QGENENIQIQAKEGDDIEELATYINGKTDKVSASVNEKGQLQLY-----IAGKETSGTLS 257
++ +Q++ G + + + + D+++ ++E G+ + +AG ++G
Sbjct: 89 LQRMRDLTVQSENGANSSADLSALKAEMDQLANEIDEIGKTTAFGTTKLLAGGFSAGKNF 148
Query: 258 FSGSLANELQMNLLGYEAVDNLDISSAGG---AQRAVSV--IDTALKYVDGHRSELGAMQ 312
G+ E + +L + S G A RA S+ ID A+K +D R++LGA+Q
Sbjct: 149 QVGAQDGEDIKVTVKASNKSSLSVGSLGNTTSAARASSLKKIDAAIKTIDAQRADLGAIQ 208
Query: 313 NRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSVLAQAKRQPKFV 372
NR H ISN N N+A + SRI D D+AKET+QM K Q+LQQ +++LAQA + P+
Sbjct: 209 NRLAHNISNSANTQANVADAKSRIVDVDFAKETSQMTKNQVLQQTGSAMLAQANQLPQVA 268
Query: 373 LFLL 376
L LL
Sbjct: 269 LSLL 272