Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., flagellin (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  155 bits (393), Expect = 1e-42
 Identities = 113/376 (30%), Positives = 180/376 (47%), Gaps = 81/376 (21%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           M++ +N N+ A+ A  +L+++   L+ S+ RLSSG R+ +A DDAAGL I   + + +  
Sbjct: 1   MSLVINHNMMAMNAAGNLSNSYGKLSTSVRRLSSGLRVGTAADDAAGLAIRELMRSDISA 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           L   VRNAND IS++QTA+GA+    + L RM++L+ Q+A G+ ++ +R+ +  E  A+ 
Sbjct: 61  LNQGVRNANDAISLIQTADGALGVIDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMA 120

Query: 121 DELNRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAA 180
            E+ RIA  T F G  LLNG                      N+ SD+ +  G       
Sbjct: 121 SEITRIANATDFNGLHLLNG----------------------NLSSDTHDGSGLQ----- 153

Query: 181 LADKQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGKTDKVSASVNEK 240
                   + GK +++    N                D  E   Y+   T   SA     
Sbjct: 154 --------STGKMKIHFGTAN----------------DSAEDYYYVQIGTSTASA----- 184

Query: 241 GQLQLYIAGKETSGTLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRAVSVIDTALKY 300
               L +  + T+G+  ++                     IS+   AQ+A+  I  A+  
Sbjct: 185 ----LGVGNQATAGSAGYT---------------------ISTQSAAQQALVAIQNAIIS 219

Query: 301 VDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTS 360
            D  R+ LGA+QNR ++ ISNL    ENL ++ SRI D D + E T+ ++QQIL Q + +
Sbjct: 220 KDNIRASLGALQNRLENTISNLRTQAENLQSAESRISDVDVSSEMTEFVRQQILTQSAVA 279

Query: 361 VLAQAKRQPKFVLFLL 376
           +L+QA   P+  + LL
Sbjct: 280 MLSQANSLPRMAMQLL 295