Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., flagellin FljJ from Caulobacter crescentus NA1000

 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 52/165 (31%), Positives = 89/165 (53%), Gaps = 1/165 (0%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           MA++VNTN  AL+A ++LN  ++ +     R+++G  I++AKD+AA   I+      M  
Sbjct: 1   MALSVNTNQPALIALQNLNRTNDDMQAVQTRINTGEAISTAKDNAAVWSIAQAQRADMSA 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           LG    + +   SI   A  A +  + LL+ MR+  + + + S +   R AL  +   L 
Sbjct: 61  LGAVKMSLDRATSIADVALAAGESVSDLLKLMREKVVAAKDTSLTTTSRQALNADFQGLI 120

Query: 121 DELNRIAETTSFAGRKLLNG-QFMKASFQIGASSGEAVQLSLRNM 164
             LN++  + +F G  LL+G Q    SF   A +G+A+ L+L+N+
Sbjct: 121 KNLNQVLRSATFDGANLLDGSQAADMSFLADADAGQAITLTLQNL 165



 Score = 37.0 bits (84), Expect = 7e-07
 Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 14/96 (14%)

Query: 282 SSAGGAQRAVSVIDTALKYVDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADY 341
           ++     +AV  I T  K +D H + +  + +  +  + NL               DAD 
Sbjct: 195 ATLSAVNQAVGNIGTQAKQIDAHNTFVAKLNDVLETGVGNL--------------VDADL 240

Query: 342 AKETTQMIKQQILQQVSTSVLAQAKRQPKFVLFLLR 377
           AKE+ ++   Q+ QQ+    L+ A   P+ +L L +
Sbjct: 241 AKESARLQALQVKQQLGAQALSIANGAPQIILSLFK 276