Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., flagellin FljN from Caulobacter crescentus NA1000

 Score = 73.6 bits (179), Expect = 6e-18
 Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 1/181 (0%)

Query: 4   TVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLGI 63
           ++NTN  AL+A ++LNS +  L Q  +R+++G +I SAKD+ A    +         +  
Sbjct: 5   SINTNSGALIALQNLNSTNAELTQVQQRINTGKKIGSAKDNGAIWATAKNQSATANSMNA 64

Query: 64  AVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDEL 123
              +   G S +  A  A    T LL +M++ +L +++ S + A   AL+ +  +L D++
Sbjct: 65  VKDSLQRGQSTIDVALAAGDTITDLLGKMKEKALAASDTSLNTASFNALKSDFDSLRDQI 124

Query: 124 NRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAALAD 183
            + A    F G  + NG   K +F +  S G    ++ + +    L +   S    A A 
Sbjct: 125 TKAASNAKFNGVSIANGSTAKLTF-LANSDGSGFTVTAKTLTLTGLGLTASSTFTTAAAA 183

Query: 184 K 184
           K
Sbjct: 184 K 184



 Score = 49.3 bits (116), Expect = 1e-10
 Identities = 66/317 (20%), Positives = 114/317 (35%), Gaps = 56/317 (17%)

Query: 67  NANDGISI-MQTAEGAMQETTQLLQRM---RDLSLQSANGS--NSAAERVALQEEMAALN 120
           N N G  I +Q       E TQ+ QR+   + +     NG+   +A  + A    M A+ 
Sbjct: 7   NTNSGALIALQNLNSTNAELTQVQQRINTGKKIGSAKDNGAIWATAKNQSATANSMNAVK 66

Query: 121 DELNRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAA 180
           D L R              GQ   ++  +  ++G+ +   L  M+  +L     S   A+
Sbjct: 67  DSLQR--------------GQ---STIDVALAAGDTITDLLGKMKEKALAASDTSLNTAS 109

Query: 181 LADKQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGKTDKVSASVNEK 240
               +      + Q+  +  NA+    +I                 NG T K++   N  
Sbjct: 110 FNALKSDFDSLRDQITKAASNAKFNGVSIA----------------NGSTAKLTFLANSD 153

Query: 241 GQLQLYIAGKETSGTLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRAVSVIDTALKY 300
           G                 SG       + L G     +   ++A  A+  +  IDTAL+ 
Sbjct: 154 G-----------------SGFTVTAKTLTLTGLGLTASSTFTTAAAAKTMIGTIDTALQT 196

Query: 301 VDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTS 360
                + LG         ++ +  + ++L A    + DAD AKE+ ++   Q  QQ+   
Sbjct: 197 ATNKLASLGTSSTGLDTHLTFVGKLQDSLDAGVGNLVDADLAKESAKLQSLQTKQQLGVQ 256

Query: 361 VLAQAKRQPKFVLFLLR 377
            L+ A      +L L R
Sbjct: 257 ALSIANSSSSAILSLFR 273