Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., flagellin FljM from Caulobacter crescentus NA1000

 Score = 73.2 bits (178), Expect = 8e-18
 Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 1/181 (0%)

Query: 4   TVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLGI 63
           ++NTN  AL+A ++LNS +  L Q  +R+++G +I SAKD+ A    +         +  
Sbjct: 5   SINTNSGALIALQNLNSTNAELTQVQQRINTGKKIGSAKDNGAIWATAKNQSATAGSMNA 64

Query: 64  AVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDEL 123
              +   G S +  A  A    T LL +M++ +L +++ S + A   AL+ +  +L D++
Sbjct: 65  VKDSLQRGQSTIDVALAAGDTITDLLGKMKEKALAASDTSLNTASFNALKSDFDSLRDQI 124

Query: 124 NRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAALAD 183
            + A    F G  + +G   K SF +  S G A  ++ + +    L +   S    A A 
Sbjct: 125 TKAASNAKFNGVSIADGTTTKLSF-LANSDGSAFTVTAKTLTLGGLGLTATSSFTTAAAA 183

Query: 184 K 184
           K
Sbjct: 184 K 184



 Score = 49.7 bits (117), Expect = 1e-10
 Identities = 70/317 (22%), Positives = 120/317 (37%), Gaps = 56/317 (17%)

Query: 67  NANDGISI-MQTAEGAMQETTQLLQRM---RDLSLQSANGS--NSAAERVALQEEMAALN 120
           N N G  I +Q       E TQ+ QR+   + +     NG+   +A  + A    M A+ 
Sbjct: 7   NTNSGALIALQNLNSTNAELTQVQQRINTGKKIGSAKDNGAIWATAKNQSATAGSMNAVK 66

Query: 121 DELNRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAA 180
           D L R              GQ   ++  +  ++G+ +   L  M+  +L     S   A+
Sbjct: 67  DSLQR--------------GQ---STIDVALAAGDTITDLLGKMKEKALAASDTSLNTAS 109

Query: 181 LADKQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGKTDKVSASVNEK 240
               +      + Q+  +  NA+    +I                 +G T K+S   N  
Sbjct: 110 FNALKSDFDSLRDQITKAASNAKFNGVSIA----------------DGTTTKLSFLANSD 153

Query: 241 GQLQLYIAGKETSGTLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRAVSVIDTALKY 300
           G      A   T+ TL+  G          LG  A  +   ++A  A+  +  IDTAL+ 
Sbjct: 154 GS-----AFTVTAKTLTLGG----------LGLTATSSF--TTAAAAKTMIGTIDTALQT 196

Query: 301 VDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTS 360
                + LG         ++ +  + ++L A    + DAD AKE+ ++   Q  QQ+   
Sbjct: 197 ATNKLASLGTSSTGLDTHLTFVGKLQDSLDAGVGNLVDADLAKESAKLQSLQTKQQLGVQ 256

Query: 361 VLAQAKRQPKFVLFLLR 377
            L+ A +    +L L R
Sbjct: 257 ALSIANQSSSSILSLFR 273