Pairwise Alignments

Query, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., flagellin domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  173 bits (439), Expect = 4e-48
 Identities = 91/180 (50%), Positives = 129/180 (71%), Gaps = 1/180 (0%)

Query: 1   MAMTVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRG 60
           MA+TVNTNV+++ AQ++LN++S  L  S+ERLSSG RINSAKDDAAGL ISNRL +Q+RG
Sbjct: 1   MAITVNTNVTSMKAQKNLNTSSSGLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60

Query: 61  LGIAVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALN 120
           L + +RNAND ISI Q AEGAMQE T +LQRMRDL++Q+ NG+NS  +  A+Q+E+  L+
Sbjct: 61  LDVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLTVQAENGANSTDDLDAIQKEINQLS 120

Query: 121 DELNRIAETTSFAGRKLLNGQFMKA-SFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAA 179
           +E+  I ++T+F    L+ G F    +FQ+G   GE + +S+    + SL +   +  +A
Sbjct: 121 EEITAIGDSTAFGNTLLMTGLFSTGKTFQVGHQEGEDITISVGTTNAGSLSVNALAIASA 180



 Score = 99.0 bits (245), Expect = 1e-25
 Identities = 72/244 (29%), Positives = 121/244 (49%), Gaps = 13/244 (5%)

Query: 143 MKASFQIGASSGEAVQLSLRNMRSDSLEMGGFSYVAAALADKQWQVTKGKQQLNISYVNA 202
           + +  +I ++  +A  L++ N  +  +         A  A    Q+ +G  Q      N 
Sbjct: 32  LSSGLRINSAKDDAAGLAISNRLNSQVRGLDVGMRNANDAISIAQIAEGAMQ---EQTNM 88

Query: 203 QGENENIQIQAKEG----DDIEELATYINGKTDKVSASVNEK--GQLQLYIAGKETSGTL 256
                ++ +QA+ G    DD++ +   IN  +++++A  +    G   L      T  T 
Sbjct: 89  LQRMRDLTVQAENGANSTDDLDAIQKEINQLSEEITAIGDSTAFGNTLLMTGLFSTGKTF 148

Query: 257 SFSGSLANELQMNL----LGYEAVDNLDISSAGGAQRAVSVIDTALKYVDGHRSELGAMQ 312
                   ++ +++     G  +V+ L I+SAGG   A++ ID A+K +D  R+ LGA Q
Sbjct: 149 QVGHQEGEDITISVGTTNAGSLSVNALAIASAGGRSTALANIDAAIKTIDNQRANLGAKQ 208

Query: 313 NRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSVLAQAKRQPKFV 372
           NR  + ISN  N   N+A + SRI D D+AKET+ M K Q+LQQ  +++LAQA + P+  
Sbjct: 209 NRLAYNISNSANTQANVADAKSRIVDVDFAKETSVMTKNQVLQQTGSAMLAQANQLPQVA 268

Query: 373 LFLL 376
           L LL
Sbjct: 269 LSLL 272