Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., flagellin B protein from Sinorhizobium meliloti 1021

 Score = 87.4 bits (215), Expect = 6e-22
 Identities = 98/403 (24%), Positives = 166/403 (41%), Gaps = 44/403 (10%)

Query: 4   NVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63
           ++ TN+AAM A + L    +  + +   +SSG ++  A D+AA   I+  +   +  L  
Sbjct: 3   SILTNIAAMAALQTLRTIGSNMEETQAHVSSGLRVGQAADNAAYWSIATTMRSDNMALSA 62

Query: 64  AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDEL 123
                  G +   TA   M     +++ ++   + +      K++   IQEEI  L D+L
Sbjct: 63  VQDALGLGAAKVDTAYSGMESAIEVVKEIKAKLVAATEDGVDKAK---IQEEIDQLKDQL 119

Query: 124 NRIAETTSFGGNKLLNGTFS----TKSFQIGA---DNGEAVMLTLKDMRSDNRMM----- 171
             IAE  SF G   L    S    TKS  +G+   D G AV +   D   +   +     
Sbjct: 120 TSIAEAASFSGENWLQADLSGGPVTKSV-VGSFVRDAGGAVSVKKVDYSLNTNSVLFDTA 178

Query: 172 GGTSYVAAEGKDKDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVAT------- 224
           G T  +     DK + V   +  +T  + +++G     TV A   DD+ + +        
Sbjct: 179 GNTGIL-----DKVYNVSQAS--VTLPV-NVNGTTSEYTVGAYNVDDLIDASATFDGDYA 230

Query: 225 ----------YINGQTDMVKA-SVNEKGQLQIFA-GNNKVTGDVAFSGGLAGALNMQAGT 272
                     Y+  Q   VKA  V   GQ  ++  G  K   D   +G  A  +   A  
Sbjct: 231 NVGAGALAGDYVKVQGSWVKAVDVAATGQEVVYDDGTTKWGVDTTVTGAPATNVAAPASI 290

Query: 273 AETVDTIDVTSVGGAQQSVAVIDSALKYVDSHRAELGAFQNRFNHAISNLDNINENVNAS 332
           A T+D       G     +A +D AL  + S  A+LG+   R +     ++ +++++++ 
Sbjct: 291 A-TIDITIAAQAGNLDALIAGVDEALTDMTSAAADLGSIAMRIDLQSDFVNKLSDSIDSG 349

Query: 333 KSRIKDTDFAKETTALTKSQILSQASSSVLAQAKQAPNAALSL 375
             R+ D D  +E+T L   Q   Q +   L+ A  A    L+L
Sbjct: 350 VGRLVDADMNEESTRLKALQTQQQLAIQSLSIANSASENVLTL 392