Pairwise Alignments

Query, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., flagellin/flagellar hook associated protein from Dechlorosoma suillum PS

 Score =  200 bits (508), Expect = 5e-56
 Identities = 136/376 (36%), Positives = 193/376 (51%), Gaps = 93/376 (24%)

Query: 1   MAVNVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRG 60
           MA+ VNTN++++ AQR L  +  +   S++RLSSG ++NSAKDDAAG  I+  L    RG
Sbjct: 1   MALIVNTNISSLNAQRNLATSNQSLSVSLQRLSSGLRVNSAKDDAAGSAIAEGLTSAIRG 60

Query: 61  LDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALN 120
            + ++RNANDGIS+ QTAEGA+ +  N LQR+R++S+Q++NGS S + R  +Q+E+  L 
Sbjct: 61  GNQSIRNANDGISVGQTAEGALGQIANNLQRIREISVQASNGSISDTNRSQLQKEVDQLT 120

Query: 121 DELNRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAE 180
            E++RI +TT F G KLL+G  ST +FQ+G               +DN++   TS +A  
Sbjct: 121 QEISRIVQTTEFNGTKLLSGA-STITFQVGFSGS-----------ADNQVSVDTSNLAQN 168

Query: 181 GKDKDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEK 240
           G        AG N  + TL        T TVN                            
Sbjct: 169 G-------AAGLNAYSGTL------TATGTVN---------------------------- 187

Query: 241 GQLQIFAGNNKVTGDVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQQSVAVIDSALKY 300
                          V  SGG + A+N                          +D+ +  
Sbjct: 188 ---------------VTTSGGASAAINK-------------------------LDADIAQ 207

Query: 301 VDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSS 360
           + + RA  G+ QNRF   +SNL N  EN++ASKSR+ D DFA ET  LT++QIL QA ++
Sbjct: 208 IANIRATFGSVQNRFEAVVSNLQNYVENLSASKSRLIDADFAAETAQLTRNQILQQAGTA 267

Query: 361 VLAQAKQAPNAALSLL 376
           +LAQA   P  AL+LL
Sbjct: 268 ILAQANTVPQGALTLL 283